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Items: 1 to 20 of 1041

1.

Corra: Computational framework and tools for LC-MS discovery and targeted mass spectrometry-based proteomics.

Brusniak MY, Bodenmiller B, Campbell D, Cooke K, Eddes J, Garbutt A, Lau H, Letarte S, Mueller LN, Sharma V, Vitek O, Zhang N, Aebersold R, Watts JD.

BMC Bioinformatics. 2008 Dec 16;9:542. doi: 10.1186/1471-2105-9-542.

2.

Computational methods for the comparative quantification of proteins in label-free LCn-MS experiments.

Wong JW, Sullivan MJ, Cagney G.

Brief Bioinform. 2008 Mar;9(2):156-65. Epub 2007 Sep 28. Review.

3.

Proteome informatics I: bioinformatics tools for processing experimental data.

Palagi PM, Hernandez P, Walther D, Appel RD.

Proteomics. 2006 Oct;6(20):5435-44. Review.

PMID:
16991191
4.

An assessment of software solutions for the analysis of mass spectrometry based quantitative proteomics data.

Mueller LN, Brusniak MY, Mani DR, Aebersold R.

J Proteome Res. 2008 Jan;7(1):51-61. doi: 10.1021/pr700758r. Epub 2008 Jan 4. Review.

PMID:
18173218
5.

Alignment of LC-MS images, with applications to biomarker discovery and protein identification.

Vandenbogaert M, Li-Thiao-Té S, Kaltenbach HM, Zhang R, Aittokallio T, Schwikowski B.

Proteomics. 2008 Feb;8(4):650-72. doi: 10.1002/pmic.200700791. Review.

PMID:
18297649
6.

Technical, bioinformatical and statistical aspects of liquid chromatography-mass spectrometry (LC-MS) and capillary electrophoresis-mass spectrometry (CE-MS) based clinical proteomics: a critical assessment.

Dakna M, He Z, Yu WC, Mischak H, Kolch W.

J Chromatogr B Analyt Technol Biomed Life Sci. 2009 May 1;877(13):1250-8. doi: 10.1016/j.jchromb.2008.10.048. Epub 2008 Nov 6. Review.

PMID:
19010091
7.

Discovery of regulatory molecular events and biomarkers using 2D capillary chromatography and mass spectrometry.

Powell DW, Merchant ML, Link AJ.

Expert Rev Proteomics. 2006 Feb;3(1):63-74. Review.

PMID:
16445351
8.

Recent developments in proteome informatics for mass spectrometry analysis.

Wright JC, Hubbard SJ.

Comb Chem High Throughput Screen. 2009 Feb;12(2):194-202. Review.

PMID:
19199887
9.

Global and targeted quantitative proteomics for biomarker discovery.

Veenstra TD.

J Chromatogr B Analyt Technol Biomed Life Sci. 2007 Feb 15;847(1):3-11. Epub 2006 Oct 4. Review.

PMID:
17023222
10.

Proteomics by mass spectrometry: approaches, advances, and applications.

Yates JR, Ruse CI, Nakorchevsky A.

Annu Rev Biomed Eng. 2009;11:49-79. doi: 10.1146/annurev-bioeng-061008-124934. Review.

PMID:
19400705
11.

Shotgun proteomics: tools for the analysis of complex biological systems.

Wu CC, MacCoss MJ.

Curr Opin Mol Ther. 2002 Jun;4(3):242-50. Review.

PMID:
12139310
12.

Clinical perspectives of high-resolution mass spectrometry-based proteomics in neuroscience: exemplified in amyotrophic lateral sclerosis biomarker discovery research.

Ekegren T, Hanrieder J, Bergquist J.

J Mass Spectrom. 2008 May;43(5):559-71. doi: 10.1002/jms.1409. Review.

PMID:
18416436
13.

Data processing pipelines for comprehensive profiling of proteomics samples by label-free LC-MS for biomarker discovery.

Christin C, Bischoff R, Horvatovich P.

Talanta. 2011 Jan 30;83(4):1209-24. doi: 10.1016/j.talanta.2010.10.029. Epub 2010 Nov 11. Review.

14.

Proteomics: technologies for protein analysis.

Gomase VS, Kale KV, Tagore S, Hatture SR.

Curr Drug Metab. 2008 Mar;9(3):213-20. Review.

PMID:
18336224
15.

Application of LC/MS to proteomics studies: current status and future prospects.

Chen G, Pramanik BN.

Drug Discov Today. 2009 May;14(9-10):465-71. doi: 10.1016/j.drudis.2009.02.007. Epub 2009 Feb 26. Review.

PMID:
19429505
16.

Statistical and computational methods for comparative proteomic profiling using liquid chromatography-tandem mass spectrometry.

Listgarten J, Emili A.

Mol Cell Proteomics. 2005 Apr;4(4):419-34. Epub 2005 Mar 1. Review.

17.

Alternative profiling platform based on MELDI and its applicability in clinical proteomics.

Najam-ul-Haq M, Rainer M, Trojer L, Feuerstein I, Vallant RM, Huck CW, Bakry R, Bonn GK.

Expert Rev Proteomics. 2007 Aug;4(4):447-52. Review.

PMID:
17705703
18.

Functional genomics and proteomics in the clinical neurosciences: data mining and bioinformatics.

Phan JH, Quo CF, Wang MD.

Prog Brain Res. 2006;158:83-108. Review.

PMID:
17027692
19.

The proteomic advantage: label-free quantification of proteins expressed in bovine milk during experimentally induced coliform mastitis.

Boehmer JL, DeGrasse JA, McFarland MA, Tall EA, Shefcheck KJ, Ward JL, Bannerman DD.

Vet Immunol Immunopathol. 2010 Dec 15;138(4):252-66. doi: 10.1016/j.vetimm.2010.10.004. Epub 2010 Oct 14. Review.

PMID:
21067814
20.

Mass spectrometry: from proteomics to metabolomics and lipidomics.

Griffiths WJ, Wang Y.

Chem Soc Rev. 2009 Jul;38(7):1882-96. doi: 10.1039/b618553n. Epub 2009 Feb 4. Review.

PMID:
19551169
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