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Items: 5

1.

Model-based analysis of ChIP-Seq (MACS).

Zhang Y, Liu T, Meyer CA, Eeckhoute J, Johnson DS, Bernstein BE, Nusbaum C, Myers RM, Brown M, Li W, Liu XS.

Genome Biol. 2008;9(9):R137. doi: 10.1186/gb-2008-9-9-r137. Epub 2008 Sep 17.

2.

Modeling and analysis of ChIP-chip experiments.

Gottardo R.

Methods Mol Biol. 2009;567:133-43. doi: 10.1007/978-1-60327-414-2_9. Review.

PMID:
19588090
3.

Computation for ChIP-seq and RNA-seq studies.

Pepke S, Wold B, Mortazavi A.

Nat Methods. 2009 Nov;6(11 Suppl):S22-32. doi: 10.1038/nmeth.1371. Review.

4.

[Processing and analysis of ChIP-seq data].

Gao S, Zhang N, Li B, Xu S, Ye YB, Ruan JS.

Yi Chuan. 2012 Jun;34(6):773-83. Review. Chinese.

PMID:
22698750
5.

A survey of motif finding Web tools for detecting binding site motifs in ChIP-Seq data.

Tran NT, Huang CH.

Biol Direct. 2014 Feb 20;9:4. doi: 10.1186/1745-6150-9-4. Review.

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