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Results: 13

1.

Phylogeny-aware gap placement prevents errors in sequence alignment and evolutionary analysis.

Löytynoja A, Goldman N.

Science. 2008 Jun 20;320(5883):1632-5. doi: 10.1126/science.1158395.

PMID:
18566285
[PubMed - indexed for MEDLINE]
Free Article
2.

The emergence of simian/human immunodeficiency viruses.

Myers G, MacInnes K, Korber B.

AIDS Res Hum Retroviruses. 1992 Mar;8(3):373-86. Review.

PMID:
1571197
[PubMed - indexed for MEDLINE]
3.

Alignment methods: strategies, challenges, benchmarking, and comparative overview.

Löytynoja A.

Methods Mol Biol. 2012;855:203-35. doi: 10.1007/978-1-61779-582-4_7. Review.

PMID:
22407710
[PubMed - indexed for MEDLINE]
4.

Application and accuracy of molecular phylogenies.

Hillis DM, Huelsenbeck JP, Cunningham CW.

Science. 1994 Apr 29;264(5159):671-7. Review.

PMID:
8171318
[PubMed - indexed for MEDLINE]
5.

Multiple sequence alignment in phylogenetic analysis.

Phillips A, Janies D, Wheeler W.

Mol Phylogenet Evol. 2000 Sep;16(3):317-30. Review.

PMID:
10991785
[PubMed - indexed for MEDLINE]
6.

Multiple sequence alignment: in pursuit of homologous DNA positions.

Kumar S, Filipski A.

Genome Res. 2007 Feb;17(2):127-35. Review.

PMID:
17272647
[PubMed - indexed for MEDLINE]
Free Article
7.

Strategies for multiple sequence alignment.

Nicholas HB Jr, Ropelewski AJ, Deerfield DW 2nd.

Biotechniques. 2002 Mar;32(3):572-4, 576, 578 passim. Review.

PMID:
11911661
[PubMed - indexed for MEDLINE]
8.

Detecting genetic recombination.

Weiller GF.

Methods Mol Biol. 2008;452:471-83. doi: 10.1007/978-1-60327-159-2_22. Review.

PMID:
18566778
[PubMed - indexed for MEDLINE]
9.

Origins and evolution of AIDS viruses.

Sharp PM, Bailes E, Robertson DL, Gao F, Hahn BH.

Biol Bull. 1999 Jun;196(3):338-42. Review. No abstract available.

PMID:
10390833
[PubMed - indexed for MEDLINE]
Free Article
10.

Who watches the watchmen? An appraisal of benchmarks for multiple sequence alignment.

Iantorno S, Gori K, Goldman N, Gil M, Dessimoz C.

Methods Mol Biol. 2014;1079:59-73. doi: 10.1007/978-1-62703-646-7_4. Review.

PMID:
24170395
[PubMed - indexed for MEDLINE]
11.

[Rational evolutionary design and modification of gene: a short-path of direct evolution].

Xiong AS, Yao QH, Zhang Z, Peng RH, Zhuang J, Xu F, Liu JG, Zhu H.

Yi Chuan. 2006 Jan;28(1):92-6. Review. Chinese.

PMID:
16469723
[PubMed - indexed for MEDLINE]
12.

Phylogenetic inference and parsimony analysis.

Densmore LD 3rd.

Methods Mol Biol. 2001;176:23-36. Review. No abstract available.

PMID:
11554325
[PubMed - indexed for MEDLINE]
13.

Recent progress in multiple sequence alignment: a survey.

Notredame C.

Pharmacogenomics. 2002 Jan;3(1):131-44. Review.

PMID:
11966409
[PubMed - indexed for MEDLINE]

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