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Results: 1 to 20 of 52

1.

An introduction to modeling structure from sequence.

Petsko GA.

Curr Protoc Bioinformatics. 2006 Oct;Chapter 5:Unit 5.1. doi: 10.1002/0471250953.bi0501s15. Review.

PMID:
18428765
[PubMed - indexed for MEDLINE]
2.

Five hierarchical levels of sequence-structure correlation in proteins.

Bystroff C, Shao Y, Yuan X.

Appl Bioinformatics. 2004;3(2-3):97-104. Review.

PMID:
15693735
[PubMed - indexed for MEDLINE]
3.

High-throughput modeling and analysis of protein structural dynamics.

Liu X, Karimi HA.

Brief Bioinform. 2007 Nov;8(6):432-45. Epub 2007 May 7. Review.

PMID:
17485424
[PubMed - indexed for MEDLINE]
Free Article
4.

The family feud: do proteins with similar structures fold via the same pathway?

Zarrine-Afsar A, Larson SM, Davidson AR.

Curr Opin Struct Biol. 2005 Feb;15(1):42-9. Review.

PMID:
15718132
[PubMed - indexed for MEDLINE]
5.

Multiple sequence alignments.

Wallace IM, Blackshields G, Higgins DG.

Curr Opin Struct Biol. 2005 Jun;15(3):261-6. Review.

PMID:
15963889
[PubMed - indexed for MEDLINE]
6.

Potential implications of availability of short amino acid sequences in proteins: an old and new approach to protein decoding and design.

Otaki JM, Gotoh T, Yamamoto H.

Biotechnol Annu Rev. 2008;14:109-41. doi: 10.1016/S1387-2656(08)00004-5. Review.

PMID:
18606361
[PubMed - indexed for MEDLINE]
7.

An introduction to recognizing functional domains.

Stormo GD.

Curr Protoc Bioinformatics. 2006 Oct;Chapter 2:Unit 2.1. doi: 10.1002/0471250953.bi0201s15. Review.

PMID:
18428762
[PubMed - indexed for MEDLINE]
8.

Analyzing molecular interactions.

Petsko GA.

Curr Protoc Bioinformatics. 2003 May;Chapter 8:Unit8.1. doi: 10.1002/0471250953.bi0801s01. Review.

PMID:
18428708
[PubMed - indexed for MEDLINE]
9.

Sequence comparison and protein structure prediction.

Dunbrack RL Jr.

Curr Opin Struct Biol. 2006 Jun;16(3):374-84. Epub 2006 May 19. Review.

PMID:
16713709
[PubMed - indexed for MEDLINE]
10.

Predicting 3D structures of protein-protein complexes.

Vakser IA, Kundrotas P.

Curr Pharm Biotechnol. 2008 Apr;9(2):57-66. Review.

PMID:
18393862
[PubMed - indexed for MEDLINE]
11.

Protein structure prediction in structure based drug design.

Takeda-Shitaka M, Takaya D, Chiba C, Tanaka H, Umeyama H.

Curr Med Chem. 2004 Mar;11(5):551-8. Review.

PMID:
15032603
[PubMed - indexed for MEDLINE]
12.

Computer-based design of novel protein structures.

Butterfoss GL, Kuhlman B.

Annu Rev Biophys Biomol Struct. 2006;35:49-65. Review.

PMID:
16689627
[PubMed - indexed for MEDLINE]
13.

Large-scale prediction of protein structure and function from sequence.

Tosatto SC, Toppo S.

Curr Pharm Des. 2006;12(17):2067-86. Review.

PMID:
16796556
[PubMed - indexed for MEDLINE]
14.

Recognition-induced conformational changes in protein-protein docking.

Lensink MF, Méndez R.

Curr Pharm Biotechnol. 2008 Apr;9(2):77-86. Review.

PMID:
18393864
[PubMed - indexed for MEDLINE]
15.

The WWWH of remote homolog detection: the state of the art.

Fariselli P, Rossi I, Capriotti E, Casadio R.

Brief Bioinform. 2007 Mar;8(2):78-87. Epub 2006 Sep 26. Review.

PMID:
17003074
[PubMed - indexed for MEDLINE]
Free Article
16.

Structural divergence and distant relationships in proteins: evolution of the globins.

Lecomte JT, Vuletich DA, Lesk AM.

Curr Opin Struct Biol. 2005 Jun;15(3):290-301. Review.

PMID:
15922591
[PubMed - indexed for MEDLINE]
17.

Protein folding: from the levinthal paradox to structure prediction.

Honig B.

J Mol Biol. 1999 Oct 22;293(2):283-93. Review.

PMID:
10550209
[PubMed - indexed for MEDLINE]
18.

Comparative protein modeling by satisfaction of spatial restraints.

Sali A.

Mol Med Today. 1995 Sep;1(6):270-7. Review.

PMID:
9415161
[PubMed - indexed for MEDLINE]
19.

Characterization and prediction of protein interfaces to infer protein-protein interaction networks.

Keskin O, Tuncbag N, Gursoy A.

Curr Pharm Biotechnol. 2008 Apr;9(2):67-76. Review.

PMID:
18393863
[PubMed - indexed for MEDLINE]
20.

Simulating protein evolution in sequence and structure space.

Xia Y, Levitt M.

Curr Opin Struct Biol. 2004 Apr;14(2):202-7. Review.

PMID:
15093835
[PubMed - indexed for MEDLINE]

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