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Results: 1 to 20 of 22

1.

TM4 microarray software suite.

Saeed AI, Bhagabati NK, Braisted JC, Liang W, Sharov V, Howe EA, Li J, Thiagarajan M, White JA, Quackenbush J.

Methods Enzymol. 2006;411:134-93. Review.

PMID:
16939790
[PubMed - indexed for MEDLINE]
2.

Bioinformatics analysis of microarray data.

Zhang Y, Szustakowski J, Schinke M.

Methods Mol Biol. 2009;573:259-84. doi: 10.1007/978-1-60761-247-6_15. Review.

PMID:
19763933
[PubMed - indexed for MEDLINE]
3.

An overview of Spotfire for gene-expression studies.

Kaushal D, Naeve CW.

Curr Protoc Bioinformatics. 2004 Sep;Chapter 7:Unit 7.7. doi: 10.1002/0471250953.bi0707s6. Review.

PMID:
18428733
[PubMed - indexed for MEDLINE]
4.

Discovering patterns in microarray data.

Burke HB.

Mol Diagn. 2000 Dec;5(4):349-57. Review.

PMID:
11172499
[PubMed - indexed for MEDLINE]
5.

Analysis and management of microarray gene expression data.

Grant GR, Manduchi E, Stoeckert CJ Jr.

Curr Protoc Mol Biol. 2007 Jan;Chapter 19:Unit 19.6. doi: 10.1002/0471142727.mb1906s77. Review.

PMID:
18265395
[PubMed - indexed for MEDLINE]
6.

Analysis of a multifactor microarray study using Partek genomics solution.

Downey T.

Methods Enzymol. 2006;411:256-70. Review.

PMID:
16939794
[PubMed - indexed for MEDLINE]
7.

Pre-processing of microarray data and analysis of differential expression.

Durinck S.

Methods Mol Biol. 2008;452:89-110. doi: 10.1007/978-1-60327-159-2_4. Review.

PMID:
18563370
[PubMed - indexed for MEDLINE]
8.

Comparative evaluation of microarray analysis software.

Liu DK, Yao B, Fayz B, Womble DD, Krawetz SA.

Mol Biotechnol. 2004 Mar;26(3):225-32. Review.

PMID:
15004292
[PubMed - indexed for MEDLINE]
9.

Gene-set approach for expression pattern analysis.

Nam D, Kim SY.

Brief Bioinform. 2008 May;9(3):189-97. doi: 10.1093/bib/bbn001. Epub 2008 Jan 17. Review. Erratum in: Brief Bioinform. 2008 Sep;9(5):450.

PMID:
18202032
[PubMed - indexed for MEDLINE]
Free Article
10.

Analysis of expression data: an overview.

Grewal A, Lambert P, Stockton J.

Curr Protoc Bioinformatics. 2007 Mar;Chapter 7:Unit 7.1. doi: 10.1002/0471250953.bi0701s17. Review.

PMID:
18428793
[PubMed - indexed for MEDLINE]
11.

Microarray data analysis for differential expression: a tutorial.

Suárez E, Burguete A, Mclachlan GJ.

P R Health Sci J. 2009 Jun;28(2):89-104. Review.

PMID:
19530550
[PubMed - indexed for MEDLINE]
12.

Data storage and analysis in ArrayExpress.

Brazma A, Kapushesky M, Parkinson H, Sarkans U, Shojatalab M.

Methods Enzymol. 2006;411:370-86. Review.

PMID:
16939801
[PubMed - indexed for MEDLINE]
13.

Gene discovery in neuropharmacological and behavioral studies using Affymetrix microarray data.

Reimers M, Heilig M, Sommer WH.

Methods. 2005 Nov;37(3):219-28. Review.

PMID:
16308151
[PubMed - indexed for MEDLINE]
14.

Clustering microarray data.

Gollub J, Sherlock G.

Methods Enzymol. 2006;411:194-213. Review.

PMID:
16939791
[PubMed - indexed for MEDLINE]
15.

An assessment of recently published gene expression data analyses: reporting experimental design and statistical factors.

Jafari P, Azuaje F.

BMC Med Inform Decis Mak. 2006 Jun 21;6:27. Review.

PMID:
16790051
[PubMed - indexed for MEDLINE]
Free PMC Article
16.

Bioconductor: an open source framework for bioinformatics and computational biology.

Reimers M, Carey VJ.

Methods Enzymol. 2006;411:119-34. Review.

PMID:
16939789
[PubMed - indexed for MEDLINE]
17.

The analysis of microarray data.

Hariharan R.

Pharmacogenomics. 2003 Jul;4(4):477-97. Review.

PMID:
12831325
[PubMed - indexed for MEDLINE]
18.

An introduction to BioArray Software Environment.

Troein C, Vallon-Christersson J, Saal LH.

Methods Enzymol. 2006;411:99-119. Review.

PMID:
16939788
[PubMed - indexed for MEDLINE]
19.

Microarray-based expression profiling and informatics.

Simon R.

Curr Opin Biotechnol. 2008 Feb;19(1):26-9. Epub 2007 Nov 28. Review.

PMID:
18053704
[PubMed - indexed for MEDLINE]
Free PMC Article
20.

Microarray analysis of idiopathic pulmonary fibrosis.

Kaminski N.

Am J Respir Cell Mol Biol. 2003 Sep;29(3 Suppl):S32-6. Review. No abstract available.

PMID:
14503551
[PubMed - indexed for MEDLINE]

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