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Results: 18

1.

Comprehensive genome analysis of 203 genomes provides structural genomics with new insights into protein family space.

Marsden RL, Lee D, Maibaum M, Yeats C, Orengo CA.

Nucleic Acids Res. 2006 Feb 15;34(3):1066-80. Print 2006.

PMID:
16481312
[PubMed - indexed for MEDLINE]
Free PMC Article
2.

Exploiting protein structure data to explore the evolution of protein function and biological complexity.

Marsden RL, Ranea JA, Sillero A, Redfern O, Yeats C, Maibaum M, Lee D, Addou S, Reeves GA, Dallman TJ, Orengo CA.

Philos Trans R Soc Lond B Biol Sci. 2006 Mar 29;361(1467):425-40. Review.

PMID:
16524831
[PubMed - indexed for MEDLINE]
Free PMC Article
3.

PSI-2: structural genomics to cover protein domain family space.

Dessailly BH, Nair R, Jaroszewski L, Fajardo JE, Kouranov A, Lee D, Fiser A, Godzik A, Rost B, Orengo C.

Structure. 2009 Jun 10;17(6):869-81. doi: 10.1016/j.str.2009.03.015. Review.

PMID:
19523904
[PubMed - indexed for MEDLINE]
Free PMC Article
4.

A structural perspective on genome evolution.

Lee D, Grant A, Buchan D, Orengo C.

Curr Opin Struct Biol. 2003 Jun;13(3):359-69. Review.

PMID:
12831888
[PubMed - indexed for MEDLINE]
5.

Protein families and their evolution-a structural perspective.

Orengo CA, Thornton JM.

Annu Rev Biochem. 2005;74:867-900. Review.

PMID:
15954844
[PubMed - indexed for MEDLINE]
6.

Survey of current protein family databases and their application in comparative, structural and functional genomics.

Redfern O, Grant A, Maibaum M, Orengo C.

J Chromatogr B Analyt Technol Biomed Life Sci. 2005 Feb 5;815(1-2):97-107. Review.

PMID:
15652801
[PubMed - indexed for MEDLINE]
7.

Genome and protein evolution in eukaryotes.

Copley RR, Letunic I, Bork P.

Curr Opin Chem Biol. 2002 Feb;6(1):39-45. Review.

PMID:
11827821
[PubMed - indexed for MEDLINE]
8.

Structure-based functional inference in structural genomics.

Kim SH, Shin DH, Choi IG, Schulze-Gahmen U, Chen S, Kim R.

J Struct Funct Genomics. 2003;4(2-3):129-35. Review.

PMID:
14649297
[PubMed - indexed for MEDLINE]
9.

The proteome: structure, function and evolution.

Fleming K, Kelley LA, Islam SA, MacCallum RM, Muller A, Pazos F, Sternberg MJ.

Philos Trans R Soc Lond B Biol Sci. 2006 Mar 29;361(1467):441-51. Review.

PMID:
16524832
[PubMed - indexed for MEDLINE]
Free PMC Article
10.

Advances in structural genomics.

Teichmann SA, Chothia C, Gerstein M.

Curr Opin Struct Biol. 1999 Jun;9(3):390-9. Review.

PMID:
10361097
[PubMed - indexed for MEDLINE]
11.

Comparative genomics and structural biology of the molecular innovations of eukaryotes.

Aravind L, Iyer LM, Koonin EV.

Curr Opin Struct Biol. 2006 Jun;16(3):409-19. Epub 2006 May 5. Review.

PMID:
16679012
[PubMed - indexed for MEDLINE]
12.

The natural history of protein domains.

Ponting CP, Russell RR.

Annu Rev Biophys Biomol Struct. 2002;31:45-71. Epub 2001 Oct 25. Review.

PMID:
11988462
[PubMed - indexed for MEDLINE]
13.

Nothing about protein structure classification makes sense except in the light of evolution.

Valas RE, Yang S, Bourne PE.

Curr Opin Struct Biol. 2009 Jun;19(3):329-34. doi: 10.1016/j.sbi.2009.03.011. Epub 2009 Apr 24. Review.

PMID:
19394812
[PubMed - indexed for MEDLINE]
Free PMC Article
14.

Protein production from the structural genomics perspective: achievements and future needs.

Almo SC, Garforth SJ, Hillerich BS, Love JD, Seidel RD, Burley SK.

Curr Opin Struct Biol. 2013 Jun;23(3):335-44. doi: 10.1016/j.sbi.2013.02.014. Epub 2013 May 1. Review.

PMID:
23642905
[PubMed - indexed for MEDLINE]
Free PMC Article
15.

Genome comparisons highlight similarity and diversity within the eukaryotic kingdoms.

Ball CA, Cherry JM.

Curr Opin Chem Biol. 2001 Feb;5(1):86-9. Review.

PMID:
11166654
[PubMed - indexed for MEDLINE]
Free PMC Article
16.

Some remarks on predicting multi-label attributes in molecular biosystems.

Chou KC.

Mol Biosyst. 2013 Jun;9(6):1092-100. doi: 10.1039/c3mb25555g. Epub 2013 Mar 28. Review.

PMID:
23536215
[PubMed - indexed for MEDLINE]
17.

Structural genomics: keeping up with expanding knowledge of the protein universe.

Grabowski M, Joachimiak A, Otwinowski Z, Minor W.

Curr Opin Struct Biol. 2007 Jun;17(3):347-53. Epub 2007 Jun 22. Review.

PMID:
17587562
[PubMed - indexed for MEDLINE]
Free PMC Article
18.

Automated protein modelling--the proteome in 3D.

Peitsch MC, Schwede T, Guex N.

Pharmacogenomics. 2000 Aug;1(3):257-66. Review.

PMID:
11256577
[PubMed - indexed for MEDLINE]
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