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Items: 1 to 20 of 28


Identification of a Non-Pentapeptide Region Associated with Rapid Mycobacterial Evolution.

Warholm P, Light S.

PLoS One. 2016 May 5;11(5):e0154059. doi: 10.1371/journal.pone.0154059. eCollection 2016.


RepeatsDB: a database of tandem repeat protein structures.

Di Domenico T, Potenza E, Walsh I, Parra RG, Giollo M, Minervini G, Piovesan D, Ihsan A, Ferrari C, Kajava AV, Tosatto SC.

Nucleic Acids Res. 2014 Jan;42(Database issue):D352-7. doi: 10.1093/nar/gkt1175. Epub 2013 Dec 5.


A novel method to discover fluoroquinolone antibiotic resistance (qnr) genes in fragmented nucleotide sequences.

Boulund F, Johnning A, Pereira MB, Larsson DG, Kristiansson E.

BMC Genomics. 2012 Dec 11;13:695. doi: 10.1186/1471-2164-13-695.


The 1.7 Å resolution structure of At2g44920, a pentapeptide-repeat protein in the thylakoid lumen of Arabidopsis thaliana.

Ni S, McGookey ME, Tinch SL, Jones AN, Jayaraman S, Tong L, Kennedy MA.

Acta Crystallogr Sect F Struct Biol Cryst Commun. 2011 Dec 1;67(Pt 12):1480-4. doi: 10.1107/S1744309111037432. Epub 2011 Nov 25.


Pentapeptide-repeat proteins that act as topoisomerase poison resistance factors have a common dimer interface.

Vetting MW, Hegde SS, Zhang Y, Blanchard JS.

Acta Crystallogr Sect F Struct Biol Cryst Commun. 2011 Mar 1;67(Pt 3):296-302. doi: 10.1107/S1744309110053315. Epub 2011 Feb 18.


Biochemical and structural studies of a HECT-like ubiquitin ligase from Escherichia coli O157:H7.

Lin DY, Diao J, Zhou D, Chen J.

J Biol Chem. 2011 Jan 7;286(1):441-9. doi: 10.1074/jbc.M110.167643. Epub 2010 Oct 27.


A mutational analysis and molecular dynamics simulation of quinolone resistance proteins QnrA1 and QnrC from Proteus mirabilis.

Guo Q, Weng J, Xu X, Wang M, Wang X, Ye X, Wang W, Wang M.

BMC Struct Biol. 2010 Oct 8;10:33. doi: 10.1186/1472-6807-10-33.


Solenoid and non-solenoid protein recognition using stationary wavelet packet transform.

Vo A, Nguyen N, Huang H.

Bioinformatics. 2010 Sep 15;26(18):i467-73. doi: 10.1093/bioinformatics/btq371.


A framework for classification of prokaryotic protein kinases.

Tyagi N, Anamika K, Srinivasan N.

PLoS One. 2010 May 26;5(5):e10608. doi: 10.1371/journal.pone.0010608.


Plasmid-mediated quinolone resistance: a multifaceted threat.

Strahilevitz J, Jacoby GA, Hooper DC, Robicsek A.

Clin Microbiol Rev. 2009 Oct;22(4):664-89. doi: 10.1128/CMR.00016-09. Review.


CPDadh: a new peptidase family homologous to the cysteine protease domain in bacterial MARTX toxins.

Pei J, Lupardus PJ, Garcia KC, Grishin NV.

Protein Sci. 2009 Apr;18(4):856-62. doi: 10.1002/pro.78.


The pentapeptide repeat proteins MfpAMt and QnrB4 exhibit opposite effects on DNA gyrase catalytic reactions and on the ternary gyrase-DNA-quinolone complex.

Mérens A, Matrat S, Aubry A, Lascols C, Jarlier V, Soussy CJ, Cavallo JD, Cambau E.

J Bacteriol. 2009 Mar;191(5):1587-94. doi: 10.1128/JB.01205-08. Epub 2008 Dec 5.


Predictive analysis of transmissible quinolone resistance indicates Stenotrophomonas maltophilia as a potential source of a novel family of Qnr determinants.

Sánchez MB, Hernández A, Rodríguez-Martínez JM, Martínez-Martínez L, Martínez JL.

BMC Microbiol. 2008 Sep 16;8:148. doi: 10.1186/1471-2180-8-148.


Signature-tagged mutagenesis of Edwardsiella ictaluri identifies virulence-related genes, including a salmonella pathogenicity island 2 class of type III secretion systems.

Thune RL, Fernandez DH, Benoit JL, Kelly-Smith M, Rogge ML, Booth NJ, Landry CA, Bologna RA.

Appl Environ Microbiol. 2007 Dec;73(24):7934-46. Epub 2007 Oct 26.


Role of a qnr-like gene in the intrinsic resistance of Enterococcus faecalis to fluoroquinolones.

Arsène S, Leclercq R.

Antimicrob Agents Chemother. 2007 Sep;51(9):3254-8. Epub 2007 Jul 9.


Cloning, expression, crystallization and preliminary crystallographic analysis of a pentapeptide-repeat protein (Rfr23) from the bacterium Cyanothece 51142.

Buchko GW, Robinson H, Ni S, Pakrasi HB, Kennedy MA.

Acta Crystallogr Sect F Struct Biol Cryst Commun. 2006 Dec 1;62(Pt 12):1251-4. Epub 2006 Nov 30.

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