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Results: 15

Cited In for PubMed (Select 9501494)

1.

IQ-TREE: a fast and effective stochastic algorithm for estimating maximum-likelihood phylogenies.

Nguyen LT, Schmidt HA, von Haeseler A, Minh BQ.

Mol Biol Evol. 2015 Jan;32(1):268-74. doi: 10.1093/molbev/msu300. Epub 2014 Nov 3.

2.

Revising the taxonomic distribution, origin and evolution of ribosome inactivating protein genes.

Lapadula WJ, Sánchez Puerta MV, Juri Ayub M.

PLoS One. 2013 Sep 5;8(9):e72825. doi: 10.1371/journal.pone.0072825. eCollection 2013.

3.

Efficient implementation of MrBayes on multi-GPU.

Bao J, Xia H, Zhou J, Liu X, Wang G.

Mol Biol Evol. 2013 Jun;30(6):1471-9. doi: 10.1093/molbev/mst043. Epub 2013 Mar 14.

4.

HIV-1 molecular epidemiology in Guinea-Bissau, West Africa: origin, demography and migrations.

Esbjörnsson J, Mild M, Månsson F, Norrgren H, Medstrand P.

PLoS One. 2011 Feb 18;6(2):e17025. doi: 10.1371/journal.pone.0017025.

5.

MetaPIGA v2.0: maximum likelihood large phylogeny estimation using the metapopulation genetic algorithm and other stochastic heuristics.

Helaers R, Milinkovitch MC.

BMC Bioinformatics. 2010 Jul 15;11:379. doi: 10.1186/1471-2105-11-379.

6.

Efficient tree searches with available algorithms.

Giribet G.

Evol Bioinform Online. 2007 Nov 12;3:341-56.

7.

Estimation of phylogeny using a general Markov model.

Jayaswal V, Jermiin LS, Robinson J.

Evol Bioinform Online. 2007 Feb 25;1:62-80.

8.

Phylogenetic patterns and conservation among North American members of the genus Agalinis (Orobanchaceae).

Pettengill JB, Neel MC.

BMC Evol Biol. 2008 Sep 26;8:264. doi: 10.1186/1471-2148-8-264.

9.

A topological transformation in evolutionary tree search methods based on maximum likelihood combining p-ECR and neighbor joining.

Guo MZ, Li JF, Liu Y.

BMC Bioinformatics. 2008 May 28;9 Suppl 6:S4. doi: 10.1186/1471-2105-9-S6-S4.

10.

A new pheromone trail-based genetic algorithm for comparative genome assembly.

Zhao F, Zhao F, Li T, Bryant DA.

Nucleic Acids Res. 2008 Jun;36(10):3455-62. doi: 10.1093/nar/gkn168. Epub 2008 Apr 29.

11.

New methods for inferring population dynamics from microbial sequences.

Pérez-Losada M, Porter ML, Tazi L, Crandall KA.

Infect Genet Evol. 2007 Jan;7(1):24-43. Epub 2006 Apr 19. Review.

12.

PHYML Online--a web server for fast maximum likelihood-based phylogenetic inference.

Guindon S, Lethiec F, Duroux P, Gascuel O.

Nucleic Acids Res. 2005 Jul 1;33(Web Server issue):W557-9.

13.

TREEFINDER: a powerful graphical analysis environment for molecular phylogenetics.

Jobb G, von Haeseler A, Strimmer K.

BMC Evol Biol. 2004 Jun 28;4:18.

14.

The metapopulation genetic algorithm: An efficient solution for the problem of large phylogeny estimation.

Lemmon AR, Milinkovitch MC.

Proc Natl Acad Sci U S A. 2002 Aug 6;99(16):10516-21. Epub 2002 Jul 25.

15.

Matchings and phylogenetic trees.

Diaconis PW, Holmes SP.

Proc Natl Acad Sci U S A. 1998 Dec 8;95(25):14600-2.

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