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Items: 1 to 20 of 52


A sequence-specific interaction between the Saccharomyces cerevisiae rRNA gene repeats and a locus encoding an RNA polymerase I subunit affects ribosomal DNA stability.

Cahyani I, Cridge AG, Engelke DR, Ganley AR, O'Sullivan JM.

Mol Cell Biol. 2015 Feb;35(3):544-54. doi: 10.1128/MCB.01249-14. Epub 2014 Nov 24.


Chromatin structure in situ: the contribution of DNA ultrastructural cytochemistry.

Derenzini M, Olins AL, Olins DE.

Eur J Histochem. 2014 Jan 24;58(1):2307. doi: 10.4081/ejh.2014.2307. Review.


Preferential occupancy of R2 retroelements on the B chromosomes of the grasshopper Eyprepocnemis plorans.

Montiel EE, Cabrero J, Ruiz-Estévez M, Burke WD, Eickbush TH, Camacho JP, López-León MD.

PLoS One. 2014 Mar 14;9(3):e91820. doi: 10.1371/journal.pone.0091820. eCollection 2014.


Rpd3- and spt16-mediated nucleosome assembly and transcriptional regulation on yeast ribosomal DNA genes.

Johnson JM, French SL, Osheim YN, Li M, Hall L, Beyer AL, Smith JS.

Mol Cell Biol. 2013 Jul;33(14):2748-59. doi: 10.1128/MCB.00112-13. Epub 2013 May 20.


Global analysis of SUMO chain function reveals multiple roles in chromatin regulation.

Srikumar T, Lewicki MC, Costanzo M, Tkach JM, van Bakel H, Tsui K, Johnson ES, Brown GW, Andrews BJ, Boone C, Giaever G, Nislow C, Raught B.

J Cell Biol. 2013 Apr 1;201(1):145-63. doi: 10.1083/jcb.201210019.


TDP1 is an HMG chromatin protein facilitating RNA polymerase I transcription in African trypanosomes.

Narayanan MS, Rudenko G.

Nucleic Acids Res. 2013 Mar 1;41(5):2981-92. doi: 10.1093/nar/gks1469. Epub 2013 Jan 29.


A population genetic model for the maintenance of R2 retrotransposons in rRNA gene loci.

Zhou J, Eickbush MT, Eickbush TH.

PLoS Genet. 2013;9(1):e1003179. doi: 10.1371/journal.pgen.1003179. Epub 2013 Jan 10.


Chromatin structure of ribosomal RNA genes in dipterans and its relationship to the location of nucleolar organizers.

Madalena CR, Díez JL, Gorab E.

PLoS One. 2012;7(8):e44006. doi: 10.1371/journal.pone.0044006. Epub 2012 Aug 30.


Transcription and tyranny in the nucleolus: the organization, activation, dominance and repression of ribosomal RNA genes.

Pikaard CS.

Arabidopsis Book. 2002;1:e0083. doi: 10.1199/tab.0083. Epub 2002 Aug 12. No abstract available.


Transcript counting in single cells reveals dynamics of rDNA transcription.

Tan RZ, van Oudenaarden A.

Mol Syst Biol. 2010 Apr 13;6:358. doi: 10.1038/msb.2010.14.


Active VSG expression sites in Trypanosoma brucei are depleted of nucleosomes.

Stanne TM, Rudenko G.

Eukaryot Cell. 2010 Jan;9(1):136-47. doi: 10.1128/EC.00281-09. Epub 2009 Nov 13.


The pattern of R2 retrotransposon activity in natural populations of Drosophila simulans reflects the dynamic nature of the rDNA locus.

Zhou J, Eickbush TH.

PLoS Genet. 2009 Feb;5(2):e1000386. doi: 10.1371/journal.pgen.1000386. Epub 2009 Feb 20.


FACT facilitates chromatin transcription by RNA polymerases I and III.

Birch JL, Tan BC, Panov KI, Panova TB, Andersen JS, Owen-Hughes TA, Russell J, Lee SC, Zomerdijk JC.

EMBO J. 2009 Apr 8;28(7):854-65. doi: 10.1038/emboj.2009.33. Epub 2009 Feb 12.


Complementary roles of yeast Rad4p and Rad34p in nucleotide excision repair of active and inactive rRNA gene chromatin.

Tremblay M, Teng Y, Paquette M, Waters R, Conconi A.

Mol Cell Biol. 2008 Dec;28(24):7504-13. doi: 10.1128/MCB.00137-08. Epub 2008 Oct 20.


Role of recombination in the long-term retention of transposable elements in rRNA gene loci.

Zhang X, Eickbush MT, Eickbush TH.

Genetics. 2008 Nov;180(3):1617-26. doi: 10.1534/genetics.108.093716. Epub 2008 Sep 14.


Pnc1p-mediated nicotinamide clearance modifies the epigenetic properties of rDNA silencing in Saccharomyces cerevisiae.

McClure JM, Gallo CM, Smith DL Jr, Matecic M, Hontz RD, Buck SW, Racette FG, Smith JS.

Genetics. 2008 Oct;180(2):797-810. doi: 10.1534/genetics.108.091090. Epub 2008 Sep 9.


Transcription of multiple yeast ribosomal DNA genes requires targeting of UAF to the promoter by Uaf30.

Hontz RD, French SL, Oakes ML, Tongaonkar P, Nomura M, Beyer AL, Smith JS.

Mol Cell Biol. 2008 Nov;28(21):6709-19. doi: 10.1128/MCB.00703-08. Epub 2008 Sep 2.


Yeast linker histone Hho1p is required for efficient RNA polymerase I processivity and transcriptional silencing at the ribosomal DNA.

Levy A, Eyal M, Hershkovits G, Salmon-Divon M, Klutstein M, Katcoff DJ.

Proc Natl Acad Sci U S A. 2008 Aug 19;105(33):11703-8. doi: 10.1073/pnas.0709403105. Epub 2008 Aug 7.


Epigenetic regulation of retrotransposons within the nucleolus of Drosophila.

Eickbush DG, Ye J, Zhang X, Burke WD, Eickbush TH.

Mol Cell Biol. 2008 Oct;28(20):6452-61. doi: 10.1128/MCB.01015-08. Epub 2008 Aug 4.


Structure and function of ribosomal RNA gene chromatin.

Birch JL, Zomerdijk JC.

Biochem Soc Trans. 2008 Aug;36(Pt 4):619-24. doi: 10.1042/BST0360619. Review.

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