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Results: 1 to 20 of 31

Cited In for PubMed (Select 22308420)

1.

Closing the loop on the GABA shunt in plants: are GABA metabolism and signaling entwined?

Michaeli S, Fromm H.

Front Plant Sci. 2015 Jun 9;6:419. doi: 10.3389/fpls.2015.00419. eCollection 2015. Review.

2.

A computational analysis of stoichiometric constraints and trade-offs in cyanobacterial biofuel production.

Knoop H, Steuer R.

Front Bioeng Biotechnol. 2015 Apr 20;3:47. doi: 10.3389/fbioe.2015.00047. eCollection 2015.

3.

Evolutionary Conservation of Bacterial Essential Metabolic Genes across All Bacterial Culture Media.

Ish-Am O, Kristensen DM, Ruppin E.

PLoS One. 2015 Apr 20;10(4):e0123785. doi: 10.1371/journal.pone.0123785. eCollection 2015.

4.

Systems and photosystems: cellular limits of autotrophic productivity in cyanobacteria.

Burnap RL.

Front Bioeng Biotechnol. 2015 Jan 20;3:1. doi: 10.3389/fbioe.2015.00001. eCollection 2015. Review.

5.

Overexpression of flv3 improves photosynthesis in the cyanobacterium Synechocystis sp. PCC6803 by enhancement of alternative electron flow.

Hasunuma T, Matsuda M, Senga Y, Aikawa S, Toyoshima M, Shimakawa G, Miyake C, Kondo A.

Biotechnol Biofuels. 2014 Dec 31;7(1):493. doi: 10.1186/s13068-014-0183-x. eCollection 2014.

6.

Genome-scale modeling for metabolic engineering.

Simeonidis E, Price ND.

J Ind Microbiol Biotechnol. 2015 Mar;42(3):327-38. doi: 10.1007/s10295-014-1576-3. Epub 2015 Jan 13.

7.

Genome-based metabolic mapping and 13C flux analysis reveal systematic properties of an oleaginous microalga Chlorella protothecoides.

Wu C, Xiong W, Dai J, Wu Q.

Plant Physiol. 2015 Feb;167(2):586-99. doi: 10.1104/pp.114.250688. Epub 2014 Dec 15.

8.

CeCaFDB: a curated database for the documentation, visualization and comparative analysis of central carbon metabolic flux distributions explored by 13C-fluxomics.

Zhang Z, Shen T, Rui B, Zhou W, Zhou X, Shang C, Xin C, Liu X, Li G, Jiang J, Li C, Li R, Han M, You S, Yu G, Yi Y, Wen H, Liu Z, Xie X.

Nucleic Acids Res. 2015 Jan;43(Database issue):D549-57. doi: 10.1093/nar/gku1137. Epub 2014 Nov 11.

9.

Cyanobacterial biofuels: new insights and strain design strategies revealed by computational modeling.

Erdrich P, Knoop H, Steuer R, Klamt S.

Microb Cell Fact. 2014 Sep 19;13:128. doi: 10.1186/s12934-014-0128-x.

10.

Synechocystis: Not Just a Plug-Bug for CO2, but a Green E. coli.

Branco Dos Santos F, Du W, Hellingwerf KJ.

Front Bioeng Biotechnol. 2014 Sep 18;2:36. doi: 10.3389/fbioe.2014.00036. eCollection 2014. Review.

11.

Multi-level kinetic model explaining diverse roles of isozymes in prokaryotes.

Jablonsky J, Schwarz D, Hagemann M.

PLoS One. 2014 Aug 15;9(8):e105292. doi: 10.1371/journal.pone.0105292. eCollection 2014.

12.

Integrating transcriptomics with metabolic modeling predicts biomarkers and drug targets for Alzheimer's disease.

Stempler S, Yizhak K, Ruppin E.

PLoS One. 2014 Aug 15;9(8):e105383. doi: 10.1371/journal.pone.0105383. eCollection 2014.

13.

Proteome-wide light/dark modulation of thiol oxidation in cyanobacteria revealed by quantitative site-specific redox proteomics.

Guo J, Nguyen AY, Dai Z, Su D, Gaffrey MJ, Moore RJ, Jacobs JM, Monroe ME, Smith RD, Koppenaal DW, Pakrasi HB, Qian WJ.

Mol Cell Proteomics. 2014 Dec;13(12):3270-85. doi: 10.1074/mcp.M114.041160. Epub 2014 Aug 12.

PMID:
25118246
14.

A computational study of the Warburg effect identifies metabolic targets inhibiting cancer migration.

Yizhak K, Le Dévédec SE, Rogkoti VM, Baenke F, de Boer VC, Frezza C, Schulze A, van de Water B, Ruppin E.

Mol Syst Biol. 2014 Aug 1;10:744. doi: 10.15252/msb.20134993. Erratum in: Mol Syst Biol. 2014 Nov;10(11):765.

15.

Toward a systems-level understanding of gene regulatory, protein interaction, and metabolic networks in cyanobacteria.

Hernández-Prieto MA, Semeniuk TA, Futschik ME.

Front Genet. 2014 Jul 2;5:191. doi: 10.3389/fgene.2014.00191. eCollection 2014. Review.

16.

fastGapFill: efficient gap filling in metabolic networks.

Thiele I, Vlassis N, Fleming RM.

Bioinformatics. 2014 Sep 1;30(17):2529-31. doi: 10.1093/bioinformatics/btu321. Epub 2014 May 7.

17.

A Diel Flux Balance Model Captures Interactions between Light and Dark Metabolism during Day-Night Cycles in C3 and Crassulacean Acid Metabolism Leaves.

Cheung CY, Poolman MG, Fell DA, Ratcliffe RG, Sweetlove LJ.

Plant Physiol. 2014 Mar 4;165(2):917-929. [Epub ahead of print]

18.

Introduction of a synthetic CO₂-fixing photorespiratory bypass into a cyanobacterium.

Shih PM, Zarzycki J, Niyogi KK, Kerfeld CA.

J Biol Chem. 2014 Apr 4;289(14):9493-500. doi: 10.1074/jbc.C113.543132. Epub 2014 Feb 20.

19.

A data integration and visualization resource for the metabolic network of Synechocystis sp. PCC 6803.

Maarleveld TR, Boele J, Bruggeman FJ, Teusink B.

Plant Physiol. 2014 Mar;164(3):1111-21. doi: 10.1104/pp.113.224394. Epub 2014 Jan 8.

20.

Synthetic biology of cyanobacteria: unique challenges and opportunities.

Berla BM, Saha R, Immethun CM, Maranas CD, Moon TS, Pakrasi HB.

Front Microbiol. 2013 Aug 27;4:246. doi: 10.3389/fmicb.2013.00246. eCollection 2013. Review.

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