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Results: 1 to 20 of 22

1.

Bacterial nucleoid-associated protein uncouples transcription levels from transcription timing.

Zwir I, Yeo WS, Shin D, Latifi T, Huang H, Groisman EA.

MBio. 2014 Oct 7;5(5):e01485-14. doi: 10.1128/mBio.01485-14.

PMID:
25293763
[PubMed - in process]
Free PMC Article
2.

Delayed Ras/PKA signaling augments the unfolded protein response.

Pincus D, Aranda-Díaz A, Zuleta IA, Walter P, El-Samad H.

Proc Natl Acad Sci U S A. 2014 Oct 14;111(41):14800-5. doi: 10.1073/pnas.1409588111. Epub 2014 Oct 1.

PMID:
25275008
[PubMed - in process]
Free PMC Article
3.

A microfluidic system for studying ageing and dynamic single-cell responses in budding yeast.

Crane MM, Clark IB, Bakker E, Smith S, Swain PS.

PLoS One. 2014 Jun 20;9(6):e100042. doi: 10.1371/journal.pone.0100042. eCollection 2014.

PMID:
24950344
[PubMed - in process]
Free PMC Article
4.

A dynamic interplay of nucleosome and Msn2 binding regulates kinetics of gene activation and repression following stress.

Elfving N, Chereji RV, Bharatula V, Björklund S, Morozov AV, Broach JR.

Nucleic Acids Res. 2014;42(9):5468-82. doi: 10.1093/nar/gku176. Epub 2014 Mar 5.

PMID:
24598258
[PubMed - indexed for MEDLINE]
Free PMC Article
5.

High-throughput analysis of NF-κB dynamics in single cells reveals basal nuclear localization of NF-κB and spontaneous activation of oscillations.

Zambrano S, Bianchi ME, Agresti A.

PLoS One. 2014 Mar 4;9(3):e90104. doi: 10.1371/journal.pone.0090104. eCollection 2014.

PMID:
24595030
[PubMed - in process]
Free PMC Article
6.

Functional roles of pulsing in genetic circuits.

Levine JH, Lin Y, Elowitz MB.

Science. 2013 Dec 6;342(6163):1193-200. doi: 10.1126/science.1239999. Review.

PMID:
24311681
[PubMed - indexed for MEDLINE]
Free PMC Article
7.

Msn2 coordinates a stoichiometric gene expression program.

Stewart-Ornstein J, Nelson C, DeRisi J, Weissman JS, El-Samad H.

Curr Biol. 2013 Dec 2;23(23):2336-45. doi: 10.1016/j.cub.2013.09.043. Epub 2013 Nov 7.

PMID:
24210615
[PubMed - indexed for MEDLINE]
Free PMC Article
8.

Promoter decoding of transcription factor dynamics involves a trade-off between noise and control of gene expression.

Hansen AS, O'Shea EK.

Mol Syst Biol. 2013 Nov 5;9:704. doi: 10.1038/msb.2013.56.

PMID:
24189399
[PubMed - indexed for MEDLINE]
Free PMC Article
9.

Promoter decoding of transcription factor dynamics.

Moody AD, Batchelor E.

Mol Syst Biol. 2013 Nov 5;9:703. doi: 10.1038/msb.2013.63. No abstract available.

PMID:
24189398
[PubMed - indexed for MEDLINE]
Free PMC Article
10.

Decisions on the fly in cellular sensory systems.

Siggia ED, Vergassola M.

Proc Natl Acad Sci U S A. 2013 Sep 24;110(39):E3704-12. doi: 10.1073/pnas.1314081110. Epub 2013 Sep 9.

PMID:
24019464
[PubMed - indexed for MEDLINE]
Free PMC Article
11.

The yeast environmental stress response regulates mutagenesis induced by proteotoxic stress.

Shor E, Fox CA, Broach JR.

PLoS Genet. 2013;9(8):e1003680. doi: 10.1371/journal.pgen.1003680. Epub 2013 Aug 1.

PMID:
23935537
[PubMed - indexed for MEDLINE]
Free PMC Article
12.

Modeling mutant phenotypes and oscillatory dynamics in the Saccharomyces cerevisiae cAMP-PKA pathway.

Gonzales K, Kayıkçı O, Schaeffer DG, Magwene PM.

BMC Syst Biol. 2013 May 17;7:40. doi: 10.1186/1752-0509-7-40.

PMID:
23680078
[PubMed - indexed for MEDLINE]
Free PMC Article
13.

Noise and interlocking signaling pathways promote distinct transcription factor dynamics in response to different stresses.

Petrenko N, Chereji RV, McClean MN, Morozov AV, Broach JR.

Mol Biol Cell. 2013 Jun;24(12):2045-57. doi: 10.1091/mbc.E12-12-0870. Epub 2013 Apr 24.

PMID:
23615444
[PubMed - indexed for MEDLINE]
Free PMC Article
14.

Encoding and decoding cellular information through signaling dynamics.

Purvis JE, Lahav G.

Cell. 2013 Feb 28;152(5):945-56. doi: 10.1016/j.cell.2013.02.005. Review.

PMID:
23452846
[PubMed - indexed for MEDLINE]
Free PMC Article
15.

Calmodulin transduces Ca2+ oscillations into differential regulation of its target proteins.

Slavov N, Carey J, Linse S.

ACS Chem Neurosci. 2013 Apr 17;4(4):601-12. doi: 10.1021/cn300218d. Epub 2013 Feb 5.

PMID:
23384199
[PubMed - indexed for MEDLINE]
Free PMC Article
16.

Tunable signal processing through modular control of transcription factor translocation.

Hao N, Budnik BA, Gunawardena J, O'Shea EK.

Science. 2013 Jan 25;339(6118):460-4. doi: 10.1126/science.1227299.

PMID:
23349292
[PubMed - indexed for MEDLINE]
Free PMC Article
17.

The yeast transcription factor Crz1 is activated by light in a Ca2+/calcineurin-dependent and PKA-independent manner.

Bodvard K, Jörhov A, Blomberg A, Molin M, Käll M.

PLoS One. 2013;8(1):e53404. doi: 10.1371/journal.pone.0053404. Epub 2013 Jan 15.

PMID:
23335962
[PubMed - indexed for MEDLINE]
Free PMC Article
18.

Yeast protein phosphatase 2A-Cdc55 regulates the transcriptional response to hyperosmolarity stress by regulating Msn2 and Msn4 chromatin recruitment.

Reiter W, Klopf E, De Wever V, Anrather D, Petryshyn A, Roetzer A, Niederacher G, Roitinger E, Dohnal I, Görner W, Mechtler K, Brocard C, Schüller C, Ammerer G.

Mol Cell Biol. 2013 Mar;33(5):1057-72. doi: 10.1128/MCB.00834-12. Epub 2012 Dec 28.

PMID:
23275436
[PubMed - indexed for MEDLINE]
Free PMC Article
19.

Genome-wide characterization of the phosphate starvation response in Schizosaccharomyces pombe.

Carter-O'Connell I, Peel MT, Wykoff DD, O'Shea EK.

BMC Genomics. 2012 Dec 12;13:697. doi: 10.1186/1471-2164-13-697.

PMID:
23231582
[PubMed - indexed for MEDLINE]
Free PMC Article
20.

Frequency-modulated pulses of ERK activity transmit quantitative proliferation signals.

Albeck JG, Mills GB, Brugge JS.

Mol Cell. 2013 Jan 24;49(2):249-61. doi: 10.1016/j.molcel.2012.11.002. Epub 2012 Dec 6.

PMID:
23219535
[PubMed - indexed for MEDLINE]
Free PMC Article

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