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Results: 1 to 20 of 23

1.

Targeted germ line disruptions reveal general and species-specific roles for paralog group 1 hox genes in zebrafish.

Weicksel SE, Gupta A, Zannino DA, Wolfe SA, Sagerström CG.

BMC Dev Biol. 2014 Jun 5;14:25. doi: 10.1186/1471-213X-14-25.

PMID:
24902847
[PubMed - indexed for MEDLINE]
Free PMC Article
2.

Emerging gene editing strategies for Duchenne muscular dystrophy targeting stem cells.

Bertoni C.

Front Physiol. 2014 Apr 21;5:148. doi: 10.3389/fphys.2014.00148. eCollection 2014. Review.

PMID:
24795643
[PubMed]
Free PMC Article
3.

The zebrafish model system in cardiovascular research: A tiny fish with mighty prospects.

Poon KL, Brand T.

Glob Cardiol Sci Pract. 2013 Nov 1;2013(1):9-28. doi: 10.5339/gcsp.2013.4. eCollection 2013. Review. No abstract available.

PMID:
24688998
[PubMed]
Free PMC Article
4.

An improved predictive recognition model for Cys(2)-His(2) zinc finger proteins.

Gupta A, Christensen RG, Bell HA, Goodwin M, Patel RY, Pandey M, Enuameh MS, Rayla AL, Zhu C, Thibodeau-Beganny S, Brodsky MH, Joung JK, Wolfe SA, Stormo GD.

Nucleic Acids Res. 2014 Apr;42(8):4800-12. doi: 10.1093/nar/gku132. Epub 2014 Feb 12.

PMID:
24523353
[PubMed - indexed for MEDLINE]
Free PMC Article
5.

Deep sequencing of large library selections allows computational discovery of diverse sets of zinc fingers that bind common targets.

Persikov AV, Rowland EF, Oakes BL, Singh M, Noyes MB.

Nucleic Acids Res. 2014 Feb;42(3):1497-508. doi: 10.1093/nar/gkt1034. Epub 2013 Nov 7.

PMID:
24214968
[PubMed - indexed for MEDLINE]
Free PMC Article
6.

Heritable and precise zebrafish genome editing using a CRISPR-Cas system.

Hwang WY, Fu Y, Reyon D, Maeder ML, Kaini P, Sander JD, Joung JK, Peterson RT, Yeh JR.

PLoS One. 2013 Jul 9;8(7):e68708. doi: 10.1371/journal.pone.0068708. Print 2013.

PMID:
23874735
[PubMed - indexed for MEDLINE]
Free PMC Article
7.

Haemodynamically dependent valvulogenesis of zebrafish heart is mediated by flow-dependent expression of miR-21.

Banjo T, Grajcarek J, Yoshino D, Osada H, Miyasaka KY, Kida YS, Ueki Y, Nagayama K, Kawakami K, Matsumoto T, Sato M, Ogura T.

Nat Commun. 2013;4:1978. doi: 10.1038/ncomms2978.

PMID:
23748970
[PubMed - indexed for MEDLINE]
Free PMC Article
8.

Chromosomal deletions and inversions mediated by TALENs and CRISPR/Cas in zebrafish.

Xiao A, Wang Z, Hu Y, Wu Y, Luo Z, Yang Z, Zu Y, Li W, Huang P, Tong X, Zhu Z, Lin S, Zhang B.

Nucleic Acids Res. 2013 Aug;41(14):e141. doi: 10.1093/nar/gkt464. Epub 2013 Jun 6.

PMID:
23748566
[PubMed - indexed for MEDLINE]
Free PMC Article
9.

Targeted chromosomal deletions and inversions in zebrafish.

Gupta A, Hall VL, Kok FO, Shin M, McNulty JC, Lawson ND, Wolfe SA.

Genome Res. 2013 Jun;23(6):1008-17. doi: 10.1101/gr.154070.112. Epub 2013 Mar 11.

PMID:
23478401
[PubMed - indexed for MEDLINE]
Free PMC Article
10.

Global analysis of Drosophila Cys₂-His₂ zinc finger proteins reveals a multitude of novel recognition motifs and binding determinants.

Enuameh MS, Asriyan Y, Richards A, Christensen RG, Hall VL, Kazemian M, Zhu C, Pham H, Cheng Q, Blatti C, Brasefield JA, Basciotta MD, Ou J, McNulty JC, Zhu LJ, Celniker SE, Sinha S, Stormo GD, Brodsky MH, Wolfe SA.

Genome Res. 2013 Jun;23(6):928-40. doi: 10.1101/gr.151472.112. Epub 2013 Mar 7.

PMID:
23471540
[PubMed - indexed for MEDLINE]
Free PMC Article
11.

Efficient methods for targeted mutagenesis in zebrafish using zinc-finger nucleases: data from targeting of nine genes using CompoZr or CoDA ZFNs.

Sood R, Carrington B, Bishop K, Jones M, Rissone A, Candotti F, Chandrasekharappa SC, Liu P.

PLoS One. 2013;8(2):e57239. doi: 10.1371/journal.pone.0057239. Epub 2013 Feb 22.

PMID:
23451191
[PubMed - indexed for MEDLINE]
Free PMC Article
12.

A large-scale in vivo analysis reveals that TALENs are significantly more mutagenic than ZFNs generated using context-dependent assembly.

Chen S, Oikonomou G, Chiu CN, Niles BJ, Liu J, Lee DA, Antoshechkin I, Prober DA.

Nucleic Acids Res. 2013 Feb 1;41(4):2769-78. doi: 10.1093/nar/gks1356. Epub 2013 Jan 8.

PMID:
23303782
[PubMed - indexed for MEDLINE]
Free PMC Article
13.

Using defined finger-finger interfaces as units of assembly for constructing zinc-finger nucleases.

Zhu C, Gupta A, Hall VL, Rayla AL, Christensen RG, Dake B, Lakshmanan A, Kuperwasser C, Stormo GD, Wolfe SA.

Nucleic Acids Res. 2013 Feb 1;41(4):2455-65. doi: 10.1093/nar/gks1357. Epub 2013 Jan 8.

PMID:
23303772
[PubMed - indexed for MEDLINE]
Free PMC Article
14.

Highly active zinc-finger nucleases by extended modular assembly.

Bhakta MS, Henry IM, Ousterout DG, Das KT, Lockwood SH, Meckler JF, Wallen MC, Zykovich A, Yu Y, Leo H, Xu L, Gersbach CA, Segal DJ.

Genome Res. 2013 Mar;23(3):530-8. doi: 10.1101/gr.143693.112. Epub 2012 Dec 5.

PMID:
23222846
[PubMed - indexed for MEDLINE]
Free PMC Article
15.

EENdb: a database and knowledge base of ZFNs and TALENs for endonuclease engineering.

Xiao A, Wu Y, Yang Z, Hu Y, Wang W, Zhang Y, Kong L, Gao G, Zhu Z, Lin S, Zhang B.

Nucleic Acids Res. 2013 Jan;41(Database issue):D415-22. doi: 10.1093/nar/gks1144. Epub 2012 Nov 29.

PMID:
23203870
[PubMed - indexed for MEDLINE]
Free PMC Article
16.

Efficient targeted mutagenesis in the monarch butterfly using zinc-finger nucleases.

Merlin C, Beaver LE, Taylor OR, Wolfe SA, Reppert SM.

Genome Res. 2013 Jan;23(1):159-68. doi: 10.1101/gr.145599.112. Epub 2012 Sep 25.

PMID:
23009861
[PubMed - indexed for MEDLINE]
Free PMC Article
17.

Evaluation of OPEN zinc finger nucleases for direct gene targeting of the ROSA26 locus in mouse embryos.

Hermann M, Maeder ML, Rector K, Ruiz J, Becher B, Bürki K, Khayter C, Aguzzi A, Joung JK, Buch T, Pelczar P.

PLoS One. 2012;7(9):e41796. doi: 10.1371/journal.pone.0041796. Epub 2012 Sep 6.

PMID:
22970113
[PubMed - indexed for MEDLINE]
Free PMC Article
18.

Zebrafish neurofibromatosis type 1 genes have redundant functions in tumorigenesis and embryonic development.

Shin J, Padmanabhan A, de Groh ED, Lee JS, Haidar S, Dahlberg S, Guo F, He S, Wolman MA, Granato M, Lawson ND, Wolfe SA, Kim SH, Solnica-Krezel L, Kanki JP, Ligon KL, Epstein JA, Look AT.

Dis Model Mech. 2012 Nov;5(6):881-94. doi: 10.1242/dmm.009779. Epub 2012 Jul 5.

PMID:
22773753
[PubMed - indexed for MEDLINE]
Free PMC Article
19.

Hooked! Modeling human disease in zebrafish.

Santoriello C, Zon LI.

J Clin Invest. 2012 Jul 2;122(7):2337-43. doi: 10.1172/JCI60434. Epub 2012 Jul 2.

PMID:
22751109
[PubMed - indexed for MEDLINE]
Free PMC Article
20.

Improved somatic mutagenesis in zebrafish using transcription activator-like effector nucleases (TALENs).

Moore FE, Reyon D, Sander JD, Martinez SA, Blackburn JS, Khayter C, Ramirez CL, Joung JK, Langenau DM.

PLoS One. 2012;7(5):e37877. doi: 10.1371/journal.pone.0037877. Epub 2012 May 24.

PMID:
22655075
[PubMed - indexed for MEDLINE]
Free PMC Article

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