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Items: 20


Small RNA transcriptomes of mangroves evolve adaptively in extreme environments.

Wen M, Lin X, Xie M, Wang Y, Shen X, Liufu Z, Wu CI, Shi S, Tang T.

Sci Rep. 2016 Jun 9;6:27551. doi: 10.1038/srep27551.


The genome and transcriptome of Phalaenopsis yield insights into floral organ development and flowering regulation.

Huang JZ, Lin CP, Cheng TC, Huang YW, Tsai YJ, Cheng SY, Chen YW, Lee CP, Chung WC, Chang BC, Chin SW, Lee CY, Chen FC.

PeerJ. 2016 May 12;4:e2017. doi: 10.7717/peerj.2017. eCollection 2016.


Functional Characterization of Phalaenopsis aphrodite Flowering Genes PaFT1 and PaFD.

Jang S, Choi SC, Li HY, An G, Schmelzer E.

PLoS One. 2015 Aug 28;10(8):e0134987. doi: 10.1371/journal.pone.0134987. eCollection 2015.


Characterization and comparative profiling of the small RNA transcriptomes in two phases of flowering in Cymbidium ensifolium.

Li X, Jin F, Jin L, Jackson A, Ma X, Shu X, Wu D, Jin G.

BMC Genomics. 2015 Aug 20;16:622. doi: 10.1186/s12864-015-1764-1.


Constitutive Expression of Rice MicroRNA528 Alters Plant Development and Enhances Tolerance to Salinity Stress and Nitrogen Starvation in Creeping Bentgrass.

Yuan S, Li Z, Li D, Yuan N, Hu Q, Luo H.

Plant Physiol. 2015 Sep;169(1):576-93. doi: 10.1104/pp.15.00899. Epub 2015 Jul 29.


Genetic Architecture of Natural Variation in Thermal Responses of Arabidopsis.

Sanchez-Bermejo E, Zhu W, Tasset C, Eimer H, Sureshkumar S, Singh R, Sundaramoorthi V, Colling L, Balasubramanian S.

Plant Physiol. 2015 Sep;169(1):647-59. doi: 10.1104/pp.15.00942. Epub 2015 Jul 20.


Evidence of purifying selection and co-evolution at the fold-back arm of the novel precursor microRNA159 gene in Phalaenopsis Species (Orchidaceae).

Tsai CC, Chiang YC, Weng IS, Lin YS, Chou CH.

PLoS One. 2014 Dec 3;9(12):e114493. doi: 10.1371/journal.pone.0114493. eCollection 2014.


De novo transcriptome assembly from inflorescence of Orchis italica: analysis of coding and non-coding transcripts.

De Paolo S, Salvemini M, Gaudio L, Aceto S.

PLoS One. 2014 Jul 15;9(7):e102155. doi: 10.1371/journal.pone.0102155. eCollection 2014.


The analysis of the inflorescence miRNome of the orchid Orchis italica reveals a DEF-like MADS-box gene as a new miRNA target.

Aceto S, Sica M, De Paolo S, D'Argenio V, Cantiello P, Salvatore F, Gaudio L.

PLoS One. 2014 May 15;9(5):e97839. doi: 10.1371/journal.pone.0097839. eCollection 2014.


Growth promotion-related miRNAs in Oncidium orchid roots colonized by the endophytic fungus Piriformospora indica.

Ye W, Shen CH, Lin Y, Chen PJ, Xu X, Oelmüller R, Yeh KW, Lai Z.

PLoS One. 2014 Jan 7;9(1):e84920. doi: 10.1371/journal.pone.0084920. eCollection 2014.


Ambient temperature enhanced freezing tolerance of Chrysanthemum dichrum CdICE1 Arabidopsis via miR398.

Chen Y, Jiang J, Song A, Chen S, Shan H, Luo H, Gu C, Sun J, Zhu L, Fang W, Chen F.

BMC Biol. 2013 Dec 19;11:121. doi: 10.1186/1741-7007-11-121.


Identification of miRNAs and their target genes in peach (Prunus persica L.) using high-throughput sequencing and degradome analysis.

Luo X, Gao Z, Shi T, Cheng Z, Zhang Z, Ni Z.

PLoS One. 2013 Nov 13;8(11):e79090. doi: 10.1371/journal.pone.0079090. eCollection 2013.


Genome-wide annotation, expression profiling, and protein interaction studies of the core cell-cycle genes in Phalaenopsis aphrodite.

Lin HY, Chen JC, Wei MJ, Lien YC, Li HH, Ko SS, Liu ZH, Fang SC.

Plant Mol Biol. 2014 Jan;84(1-2):203-26. doi: 10.1007/s11103-013-0128-y. Epub 2013 Sep 25.


The AP2-like gene OitaAP2 is alternatively spliced and differentially expressed in inflorescence and vegetative tissues of the orchid Orchis italica.

Salemme M, Sica M, Iazzetti G, Gaudio L, Aceto S.

PLoS One. 2013 Oct 21;8(10):e77454. doi: 10.1371/journal.pone.0077454. eCollection 2013.


Identification and characterization of the microRNA transcriptome of a moth orchid Phalaenopsis aphrodite.

Chao YT, Su CL, Jean WH, Chen WC, Chang YC, Shih MC.

Plant Mol Biol. 2014 Mar;84(4-5):529-48. doi: 10.1007/s11103-013-0150-0. Epub 2013 Oct 31.


PASmiR: a literature-curated database for miRNA molecular regulation in plant response to abiotic stress.

Zhang S, Yue Y, Sheng L, Wu Y, Fan G, Li A, Hu X, Shangguan M, Wei C.

BMC Plant Biol. 2013 Mar 1;13:33. doi: 10.1186/1471-2229-13-33.


Genome-wide identification of miRNAs responsive to drought in peach (Prunus persica) by high-throughput deep sequencing.

Eldem V, Çelikkol Akçay U, Ozhuner E, Bakır Y, Uranbey S, Unver T.

PLoS One. 2012;7(12):e50298. doi: 10.1371/journal.pone.0050298. Epub 2012 Dec 5.


High-throughput sequencing of small RNAs and analysis of differentially expressed microRNAs associated with pistil development in Japanese apricot.

Gao Z, Shi T, Luo X, Zhang Z, Zhuang W, Wang L.

BMC Genomics. 2012 Aug 3;13:371. doi: 10.1186/1471-2164-13-371.


Uncovering small RNA-mediated responses to cold stress in a wheat thermosensitive genic male-sterile line by deep sequencing.

Tang Z, Zhang L, Xu C, Yuan S, Zhang F, Zheng Y, Zhao C.

Plant Physiol. 2012 Jun;159(2):721-38. doi: 10.1104/pp.112.196048. Epub 2012 Apr 16.

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