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Items: 15

1.

Comparative chemical genomics reveal that the spiroindolone antimalarial KAE609 (Cipargamin) is a P-type ATPase inhibitor.

Goldgof GM, Durrant JD, Ottilie S, Vigil E, Allen KE, Gunawan F, Kostylev M, Henderson KA, Yang J, Schenken J, LaMonte GM, Manary MJ, Murao A, Nachon M, Stanhope R, Prescott M, McNamara CW, Slayman CW, Amaro RE, Suzuki Y, Winzeler EA.

Sci Rep. 2016 Jun 13;6:27806. doi: 10.1038/srep27806.

2.

Pooled-matrix protein interaction screens using Barcode Fusion Genetics.

Yachie N, Petsalaki E, Mellor JC, Weile J, Jacob Y, Verby M, Ozturk SB, Li S, Cote AG, Mosca R, Knapp JJ, Ko M, Yu A, Gebbia M, Sahni N, Yi S, Tyagi T, Sheykhkarimli D, Roth JF, Wong C, Musa L, Snider J, Liu YC, Yu H, Braun P, Stagljar I, Hao T, Calderwood MA, Pelletier L, Aloy P, Hill DE, Vidal M, Roth FP.

Mol Syst Biol. 2016 Apr 22;12(4):863. doi: 10.15252/msb.20156660.

3.

Kalkipyrone B, a marine cyanobacterial γ-pyrone possessing cytotoxic and anti-fungal activities.

Bertin MJ, Demirkiran O, Navarro G, Moss NA, Lee J, Goldgof GM, Vigil E, Winzeler EA, Valeriote FA, Gerwick WH.

Phytochemistry. 2016 Feb;122:113-8. doi: 10.1016/j.phytochem.2015.11.011. Epub 2015 Nov 26.

PMID:
26632528
4.

Efforts to make and apply humanized yeast.

Laurent JM, Young JH, Kachroo AH, Marcotte EM.

Brief Funct Genomics. 2016 Mar;15(2):155-63. doi: 10.1093/bfgp/elv041. Epub 2015 Oct 13.

5.

Cloning Should Be Simple: Escherichia coli DH5α-Mediated Assembly of Multiple DNA Fragments with Short End Homologies.

Kostylev M, Otwell AE, Richardson RE, Suzuki Y.

PLoS One. 2015 Sep 8;10(9):e0137466. doi: 10.1371/journal.pone.0137466. eCollection 2015.

6.

Identification of a New Class of Antifungals Targeting the Synthesis of Fungal Sphingolipids.

Mor V, Rella A, Farnoud AM, Singh A, Munshi M, Bryan A, Naseem S, Konopka JB, Ojima I, Bullesbach E, Ashbaugh A, Linke MJ, Cushion M, Collins M, Ananthula HK, Sallans L, Desai PB, Wiederhold NP, Fothergill AW, Kirkpatrick WR, Patterson T, Wong LH, Sinha S, Giaever G, Nislow C, Flaherty P, Pan X, Cesar GV, de Melo Tavares P, Frases S, Miranda K, Rodrigues ML, Luberto C, Nimrichter L, Del Poeta M.

MBio. 2015 Jun 23;6(3):e00647. doi: 10.1128/mBio.00647-15.

7.

Control of Plasma Membrane Permeability by ABC Transporters.

Khakhina S, Johnson SS, Manoharlal R, Russo SB, Blugeon C, Lemoine S, Sunshine AB, Dunham MJ, Cowart LA, Devaux F, Moye-Rowley WS.

Eukaryot Cell. 2015 May;14(5):442-53. doi: 10.1128/EC.00021-15. Epub 2015 Feb 27.

8.

Bacterial genome reduction using the progressive clustering of deletions via yeast sexual cycling.

Suzuki Y, Assad-Garcia N, Kostylev M, Noskov VN, Wise KS, Karas BJ, Stam J, Montague MG, Hanly TJ, Enriquez NJ, Ramon A, Goldgof GM, Richter RA, Vashee S, Chuang RY, Winzeler EA, Hutchison CA 3rd, Gibson DG, Smith HO, Glass JI, Venter JC.

Genome Res. 2015 Mar;25(3):435-44. doi: 10.1101/gr.182477.114. Epub 2015 Feb 5.

9.

The insertion Green Monster (iGM) method for expression of multiple exogenous genes in yeast.

Labunskyy VM, Suzuki Y, Hanly TJ, Murao A, Roth FP, Gladyshev VN.

G3 (Bethesda). 2014 Apr 28;4(7):1183-91. doi: 10.1534/g3.114.010868.

10.

Direct transfer of whole genomes from bacteria to yeast.

Karas BJ, Jablanovic J, Sun L, Ma L, Goldgof GM, Stam J, Ramon A, Manary MJ, Winzeler EA, Venter JC, Weyman PD, Gibson DG, Glass JI, Hutchison CA 3rd, Smith HO, Suzuki Y.

Nat Methods. 2013 May;10(5):410-2. doi: 10.1038/nmeth.2433. Epub 2013 Mar 31.

11.

The green monster process for the generation of yeast strains carrying multiple gene deletions.

Suzuki Y, Stam J, Novotny M, Yachie N, Lasken RS, Roth FP.

J Vis Exp. 2012 Dec 15;(70):e4072. doi: 10.3791/4072.

12.

amdSYM, a new dominant recyclable marker cassette for Saccharomyces cerevisiae.

Solis-Escalante D, Kuijpers NG, Bongaerts N, Bolat I, Bosman L, Pronk JT, Daran JM, Daran-Lapujade P.

FEMS Yeast Res. 2013 Feb;13(1):126-39. doi: 10.1111/1567-1364.12024. Epub 2012 Dec 17.

13.

Forward chemical genetics in yeast for discovery of chemical probes targeting metabolism.

St Onge R, Schlecht U, Scharfe C, Evangelista M.

Molecules. 2012 Nov 5;17(11):13098-115. doi: 10.3390/molecules171113098. Review.

14.

Multiplex assay for condition-dependent changes in protein-protein interactions.

Schlecht U, Miranda M, Suresh S, Davis RW, St Onge RP.

Proc Natl Acad Sci U S A. 2012 Jun 5;109(23):9213-8. doi: 10.1073/pnas.1204952109. Epub 2012 May 21.

15.

Reiterative Recombination for the in vivo assembly of libraries of multigene pathways.

Wingler LM, Cornish VW.

Proc Natl Acad Sci U S A. 2011 Sep 13;108(37):15135-40. doi: 10.1073/pnas.1100507108. Epub 2011 Aug 26.

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