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Items: 1 to 20 of 365

1.

Genome-Wide Prediction and Analysis of 3D-Domain Swapped Proteins in the Human Genome from Sequence Information.

Upadhyay AK, Sowdhamini R.

PLoS One. 2016 Jul 28;11(7):e0159627. doi: 10.1371/journal.pone.0159627. eCollection 2016.

3.

Community-Reviewed Biological Network Models for Toxicology and Drug Discovery Applications.

sbv IMPROVER project team and challenge best performers, Namasivayam AA, Morales AF, Lacave ÁM, Tallam A, Simovic B, Alfaro DG, Bobbili DR, Martin F, Androsova G, Shvydchenko I, Park J, Calvo JV, Hoeng J, Peitsch MC, Racero MG, Biryukov M, Talikka M, Pérez MB, Rohatgi N, Díaz-Díaz N, Mandarapu R, Ruiz RA, Davidyan S, Narayanasamy S, Boué S, Guryanova S, Arbas SM, Menon S, Xiang Y.

Gene Regul Syst Bio. 2016 Jul 12;10:51-66. doi: 10.4137/GRSB.S39076. eCollection 2016.

4.

Integrating Transcriptomic and Proteomic Data Using Predictive Regulatory Network Models of Host Response to Pathogens.

Chasman D, Walters KB, Lopes TJ, Eisfeld AJ, Kawaoka Y, Roy S.

PLoS Comput Biol. 2016 Jul 12;12(7):e1005013. doi: 10.1371/journal.pcbi.1005013. eCollection 2016 Jul.

5.

Systems Genetic Analyses Highlight a TGFβ-FOXO3 Dependent Striatal Astrocyte Network Conserved across Species and Associated with Stress, Sleep, and Huntington's Disease.

Scarpa JR, Jiang P, Losic B, Readhead B, Gao VD, Dudley JT, Vitaterna MH, Turek FW, Kasarskis A.

PLoS Genet. 2016 Jul 8;12(7):e1006137. doi: 10.1371/journal.pgen.1006137. eCollection 2016 Jul.

6.

Clinical significance of mitofusin-2 and its signaling pathways in hepatocellular carcinoma.

Wu Y, Zhou D, Xu X, Zhao X, Huang P, Zhou X, Song W, Guo H, Wang W, Zheng S.

World J Surg Oncol. 2016 Jul 7;14(1):179. doi: 10.1186/s12957-016-0922-5.

7.

BcCluster: A Bladder Cancer Database at the Molecular Level.

Bhat A, Mokou M, Zoidakis J, Jankowski V, Vlahou A, Mischak H.

Bladder Cancer. 2016 Jan 7;2(1):65-76.

8.

Cholesterol Metabolism and Prostate Cancer Lethality.

Stopsack KH, Gerke TA, Sinnott JA, Penney KL, Tyekucheva S, Sesso HD, Andersson SO, Andrén O, Cerhan JR, Giovannucci EL, Mucci LA, Rider JR.

Cancer Res. 2016 Aug 15;76(16):4785-90. doi: 10.1158/0008-5472.CAN-16-0903. Epub 2016 Jun 20.

PMID:
27325648
9.

System Review about Function Role of ESCC Driver Gene KDM6A by Network Biology Approach.

Ran J, Li H, Li H.

ScientificWorldJournal. 2016;2016:1970904. doi: 10.1155/2016/1970904. Epub 2016 May 17.

10.

Network-driven plasma proteomics expose molecular changes in the Alzheimer's brain.

Jaeger PA, Lucin KM, Britschgi M, Vardarajan B, Huang RP, Kirby ED, Abbey R, Boeve BF, Boxer AL, Farrer LA, Finch N, Graff-Radford NR, Head E, Hoffree M, Huang R, Johns H, Karydas A, Knopman DS, Loboda A, Masliah E, Narasimhan R, Petersen RC, Podtelezhnikov A, Pradhan S, Rademakers R, Sun CH, Younkin SG, Miller BL, Ideker T, Wyss-Coray T.

Mol Neurodegener. 2016 Apr 26;11:31. doi: 10.1186/s13024-016-0095-2. Erratum in: Mol Neurodegener. 2016;11(1):42.

11.

Analysis of microRNA expression during the torpor-arousal cycle of a mammalian hibernator, the 13-lined ground squirrel.

Wu CW, Biggar KK, Luu BE, Szereszewski KE, Storey KB.

Physiol Genomics. 2016 Jun;48(6):388-96. doi: 10.1152/physiolgenomics.00005.2016. Epub 2016 Apr 15.

PMID:
27084747
12.

Comprehensive Transcriptome Meta-analysis to Characterize Host Immune Responses in Helminth Infections.

Zhou G, Stevenson MM, Geary TG, Xia J.

PLoS Negl Trop Dis. 2016 Apr 8;10(4):e0004624. doi: 10.1371/journal.pntd.0004624. eCollection 2016 Apr.

13.
14.

miTALOS v2: Analyzing Tissue Specific microRNA Function.

Preusse M, Theis FJ, Mueller NS.

PLoS One. 2016 Mar 21;11(3):e0151771. doi: 10.1371/journal.pone.0151771. eCollection 2016.

15.

Functional genetics-directed identification of novel pharmacological inhibitors of FAS- and TNF-dependent apoptosis that protect mice from acute liver failure.

Komarov AP, Komarova EA, Green K, Novototskaya LR, Baker PS, Eroshkin A, Osterman AL, Chenchick AA, Frangou C, Gudkov AV.

Cell Death Dis. 2016 Mar 17;7:e2145. doi: 10.1038/cddis.2016.45.

16.

REGene: a literature-based knowledgebase of animal regeneration that bridge tissue regeneration and cancer.

Zhao M, Rotgans B, Wang T, Cummins SF.

Sci Rep. 2016 Mar 15;6:23167. doi: 10.1038/srep23167.

17.

Rationalising the role of Keratin 9 as a biomarker for Alzheimer's disease.

Richens JL, Spencer HL, Butler M, Cantlay F, Vere KA, Bajaj N, Morgan K, O'Shea P.

Sci Rep. 2016 Mar 14;6:22962. doi: 10.1038/srep22962.

18.

Complementary Post Transcriptional Regulatory Information is Detected by PUNCH-P and Ribosome Profiling.

Zur H, Aviner R, Tuller T.

Sci Rep. 2016 Feb 22;6:21635. doi: 10.1038/srep21635.

19.

Identification of Molecular Targets for Predicting Colon Adenocarcinoma.

Wang Y, Zhang J, Li L, Xu X, Zhang Y, Teng Z, Wu F.

Med Sci Monit. 2016 Feb 12;22:460-8.

20.

Recruitment of the Mammalian Histone-modifying EMSY Complex to Target Genes Is Regulated by ZNF131.

Varier RA, Carrillo de Santa Pau E, van der Groep P, Lindeboom RG, Matarese F, Mensinga A, Smits AH, Edupuganti RR, Baltissen MP, Jansen PW, Ter Hoeve N, van Weely DR, Poser I, van Diest PJ, Stunnenberg HG, Vermeulen M.

J Biol Chem. 2016 Apr 1;291(14):7313-24. doi: 10.1074/jbc.M115.701227. Epub 2016 Feb 3.

PMID:
26841866
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