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Items: 1 to 20 of 268

1.

Integrative DNA methylome analysis of pan-cancer biomarkers in cancer discordant monozygotic twin-pairs.

Roos L, van Dongen J, Bell CG, Burri A, Deloukas P, Boomsma DI, Spector TD, Bell JT.

Clin Epigenetics. 2016 Jan 20;8:7. doi: 10.1186/s13148-016-0172-y. eCollection 2016.

2.

Genome-Wide Transcriptional Regulation Mediated by Biochemically Distinct SWI/SNF Complexes.

Raab JR, Resnick S, Magnuson T.

PLoS Genet. 2015 Dec 30;11(12):e1005748. doi: 10.1371/journal.pgen.1005748. eCollection 2015 Dec.

3.

A donor-specific epigenetic classifier for acute graft-versus-host disease severity in hematopoietic stem cell transplantation.

Paul DS, Jones A, Sellar RS, Mayor NP, Feber A, Webster AP, Afonso N, Sergeant R, Szydlo RM, Apperley JF, Widschwendter M, Mackinnon S, Marsh SG, Madrigal JA, Rakyan VK, Peggs KS, Beck S.

Genome Med. 2015 Dec 15;7(1):128. doi: 10.1186/s13073-015-0246-z.

4.

Segmenting the Human Genome into Isochores.

Cozzi P, Milanesi L, Bernardi G.

Evol Bioinform Online. 2015 Nov 25;11:253-61. doi: 10.4137/EBO.S27693. eCollection 2015.

5.

metilene: fast and sensitive calling of differentially methylated regions from bisulfite sequencing data.

Jühling F, Kretzmer H, Bernhart SH, Otto C, Stadler PF, Hoffmann S.

Genome Res. 2016 Feb;26(2):256-62. doi: 10.1101/gr.196394.115. Epub 2015 Dec 2.

PMID:
26631489
6.

Chromosome Architecture and Genome Organization.

Bernardi G.

PLoS One. 2015 Nov 30;10(11):e0143739. doi: 10.1371/journal.pone.0143739. eCollection 2015.

7.

Genome-wide DNA methylation map of human neutrophils reveals widespread inter-individual epigenetic variation.

Chatterjee A, Stockwell PA, Rodger EJ, Duncan EJ, Parry MF, Weeks RJ, Morison IM.

Sci Rep. 2015 Nov 27;5:17328. doi: 10.1038/srep17328.

8.

Differential epigenetic reprogramming in response to specific endocrine therapies promotes cholesterol biosynthesis and cellular invasion.

Nguyen VT, Barozzi I, Faronato M, Lombardo Y, Steel JH, Patel N, Darbre P, Castellano L, Győrffy B, Woodley L, Meira A, Patten DK, Vircillo V, Periyasamy M, Ali S, Frige G, Minucci S, Coombes RC, Magnani L.

Nat Commun. 2015 Nov 27;6:10044. doi: 10.1038/ncomms10044.

9.

Epigenetic engineering shows that a human centromere resists silencing mediated by H3K27me3/K9me3.

Martins NM, Bergmann JH, Shono N, Kimura H, Larionov V, Masumoto H, Earnshaw WC.

Mol Biol Cell. 2016 Jan 1;27(1):177-96. doi: 10.1091/mbc.E15-08-0605. Epub 2015 Nov 12.

PMID:
26564795
10.

Genetic fine mapping and genomic annotation defines causal mechanisms at type 2 diabetes susceptibility loci.

Gaulton KJ, Ferreira T, Lee Y, Raimondo A, Mägi R, Reschen ME, Mahajan A, Locke A, William Rayner N, Robertson N, Scott RA, Prokopenko I, Scott LJ, Green T, Sparso T, Thuillier D, Yengo L, Grallert H, Wahl S, Frånberg M, Strawbridge RJ, Kestler H, Chheda H, Eisele L, Gustafsson S, Steinthorsdottir V, Thorleifsson G, Qi L, Karssen LC, van Leeuwen EM, Willems SM, Li M, Chen H, Fuchsberger C, Kwan P, Ma C, Linderman M, Lu Y, Thomsen SK, Rundle JK, Beer NL, van de Bunt M, Chalisey A, Kang HM, Voight BF, Abecasis GR, Almgren P, Baldassarre D, Balkau B, Benediktsson R, Blüher M, Boeing H, Bonnycastle LL, Bottinger EP, Burtt NP, Carey J, Charpentier G, Chines PS, Cornelis MC, Couper DJ, Crenshaw AT, van Dam RM, Doney AS, Dorkhan M, Edkins S, Eriksson JG, Esko T, Eury E, Fadista J, Flannick J, Fontanillas P, Fox C, Franks PW, Gertow K, Gieger C, Gigante B, Gottesman O, Grant GB, Grarup N, Groves CJ, Hassinen M, Have CT, Herder C, Holmen OL, Hreidarsson AB, Humphries SE, Hunter DJ, Jackson AU, Jonsson A, Jørgensen ME, Jørgensen T, Kao WH, Kerrison ND, Kinnunen L, Klopp N, Kong A, Kovacs P, Kraft P, Kravic J, Langford C, Leander K, Liang L, Lichtner P, Lindgren CM, Lindholm E, Linneberg A, Liu CT, Lobbens S, Luan J, Lyssenko V, Männistö S, McLeod O, Meyer J, Mihailov E, Mirza G, Mühleisen TW, Müller-Nurasyid M, Navarro C, Nöthen MM, Oskolkov NN, Owen KR, Palli D, Pechlivanis S, Peltonen L, Perry JR, Platou CG, Roden M, Ruderfer D, Rybin D, van der Schouw YT, Sennblad B, Sigurðsson G, Stančáková A, Steinbach G, Storm P, Strauch K, Stringham HM, Sun Q, Thorand B, Tikkanen E, Tonjes A, Trakalo J, Tremoli E, Tuomi T, Wennauer R, Wiltshire S, Wood AR, Zeggini E, Dunham I, Birney E, Pasquali L, Ferrer J, Loos RJ, Dupuis J, Florez JC, Boerwinkle E, Pankow JS, van Duijn C, Sijbrands E, Meigs JB, Hu FB, Thorsteinsdottir U, Stefansson K, Lakka TA, Rauramaa R, Stumvoll M, Pedersen NL, Lind L, Keinanen-Kiukaanniemi SM, Korpi-Hyövälti E, Saaristo TE, Saltevo J, Kuusisto J, Laakso M, Metspalu A, Erbel R, Jöcke KH, Moebus S, Ripatti S, Salomaa V, Ingelsson E, Boehm BO, Bergman RN, Collins FS, Mohlke KL, Koistinen H, Tuomilehto J, Hveem K, Njølstad I, Deloukas P, Donnelly PJ, Frayling TM, Hattersley AT, de Faire U, Hamsten A, Illig T, Peters A, Cauchi S, Sladek R, Froguel P, Hansen T, Pedersen O, Morris AD, Palmer CN, Kathiresan S, Melander O, Nilsson PM, Groop LC, Barroso I, Langenberg C, Wareham NJ, O'Callaghan CA, Gloyn AL, Altshuler D, Boehnke M, Teslovich TM, McCarthy MI, Morris AP; DIAbetes Genetics Replication And Meta-analysis (DIAGRAM) Consortium.

Nat Genet. 2015 Dec;47(12):1415-25. doi: 10.1038/ng.3437. Epub 2015 Nov 9.

PMID:
26551672
11.

DNA-methylation in C1R is a prognostic biomarker for acute myeloid leukemia.

Božić T, Lin Q, Frobel J, Wilop S, Hoffmann M, Müller-Tidow C, Brümmendorf TH, Jost E, Wagner W.

Clin Epigenetics. 2015 Nov 4;7:116. doi: 10.1186/s13148-015-0153-6. eCollection 2015.

12.

Promoter-distal RNA polymerase II binding discriminates active from inactive CCAAT/ enhancer-binding protein beta binding sites.

Savic D, Roberts BS, Carleton JB, Partridge EC, White MA, Cohen BA, Cooper GM, Gertz J, Myers RM.

Genome Res. 2015 Dec;25(12):1791-800. doi: 10.1101/gr.191593.115. Epub 2015 Oct 20.

PMID:
26486725
13.

MicroRNA-148a regulates LDL receptor and ABCA1 expression to control circulating lipoprotein levels.

Goedeke L, Rotllan N, Canfrán-Duque A, Aranda JF, Ramírez CM, Araldi E, Lin CS, Anderson NN, Wagschal A, de Cabo R, Horton JD, Lasunción MA, Näär AM, Suárez Y, Fernández-Hernando C.

Nat Med. 2015 Nov;21(11):1280-9. doi: 10.1038/nm.3949. Epub 2015 Oct 5.

PMID:
26437365
14.

Alternative Splicing QTLs in European and African Populations.

Ongen H, Dermitzakis ET.

Am J Hum Genet. 2015 Oct 1;97(4):567-75. doi: 10.1016/j.ajhg.2015.09.004.

15.

Epigenomics and the structure of the living genome.

Friedman N, Rando OJ.

Genome Res. 2015 Oct;25(10):1482-90. doi: 10.1101/gr.190165.115.

16.

MicroRNA Promoter Identification in Arabidopsis Using Multiple Histone Markers.

Zhao Y, Wang F, Juan L.

Biomed Res Int. 2015;2015:861402. doi: 10.1155/2015/861402. Epub 2015 Sep 3.

17.

Epigenetic Heterogeneity of B-Cell Lymphoma: DNA Methylation, Gene Expression and Chromatin States.

Hopp L, Löffler-Wirth H, Binder H.

Genes (Basel). 2015 Sep 7;6(3):812-40. doi: 10.3390/genes6030812.

18.

Analysis methods for studying the 3D architecture of the genome.

Ay F, Noble WS.

Genome Biol. 2015 Sep 2;16:183. doi: 10.1186/s13059-015-0745-7.

19.

Functional diversity of CTCFs is encoded in their binding motifs.

Fang R, Wang C, Skogerbo G, Zhang Z.

BMC Genomics. 2015 Aug 28;16:649. doi: 10.1186/s12864-015-1824-6.

20.

Chromatin states and nuclear organization in development--a view from the nuclear lamina.

Mattout A, Cabianca DS, Gasser SM.

Genome Biol. 2015 Aug 25;16:174. doi: 10.1186/s13059-015-0747-5.

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