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Cited In for PubMed (Select 20595304)


Creation and Validation of an EMR-based Algorithm for Identifying Major Adverse Cardiac Events while on Statins.

Wei WQ, Feng Q, Weeke P, Bush W, Waitara MS, Iwuchukwu OF, Roden DM, Wilke RA, Stein CM, Denny JC.

AMIA Jt Summits Transl Sci Proc. 2014 Apr 7;2014:112-9. eCollection 2014.


The Mid-South clinical Data Research Network.

Rosenbloom ST, Harris P, Pulley J, Basford M, Grant J, DuBuisson A, Rothman RL.

J Am Med Inform Assoc. 2014 Jul-Aug;21(4):627-32. doi: 10.1136/amiajnl-2014-002745. Epub 2014 May 12.


Biobanks and electronic medical records: enabling cost-effective research.

Bowton E, Field JR, Wang S, Schildcrout JS, Van Driest SL, Delaney JT, Cowan J, Weeke P, Mosley JD, Wells QS, Karnes JH, Shaffer C, Peterson JF, Denny JC, Roden DM, Pulley JM.

Sci Transl Med. 2014 Apr 30;6(234):234cm3. doi: 10.1126/scitranslmed.3008604.


A natural language processing algorithm to define a venous thromboembolism phenotype.

McPeek Hinz ER, Bastarache L, Denny JC.

AMIA Annu Symp Proc. 2013 Nov 16;2013:975-83. eCollection 2013.


Agreement of Medicaid claims and electronic health records for assessing preventive care quality among adults.

Heintzman J, Bailey SR, Hoopes MJ, Le T, Gold R, O'Malley JP, Cowburn S, Marino M, Krist A, DeVoe JE.

J Am Med Inform Assoc. 2014 Jul-Aug;21(4):720-4. doi: 10.1136/amiajnl-2013-002333. Epub 2014 Feb 7.


Electronic medical records in colorectal surgery.

Turina M, Kiran RP.

Clin Colon Rectal Surg. 2013 Mar;26(1):17-22. doi: 10.1055/s-0033-1333629. Review.


Towards generating a patient's timeline: extracting temporal relationships from clinical notes.

Nikfarjam A, Emadzadeh E, Gonzalez G.

J Biomed Inform. 2013 Dec;46 Suppl:S40-7. doi: 10.1016/j.jbi.2013.11.001. Epub 2013 Nov 7.


Annotating temporal information in clinical narratives.

Sun W, Rumshisky A, Uzuner O.

J Biomed Inform. 2013 Dec;46 Suppl:S5-12. doi: 10.1016/j.jbi.2013.07.004. Epub 2013 Jul 19.


Temporal reasoning over clinical text: the state of the art.

Sun W, Rumshisky A, Uzuner O.

J Am Med Inform Assoc. 2013 Sep-Oct;20(5):814-9. doi: 10.1136/amiajnl-2013-001760. Epub 2013 May 15. Review.


Development and evaluation of an ensemble resource linking medications to their indications.

Wei WQ, Cronin RM, Xu H, Lasko TA, Bastarache L, Denny JC.

J Am Med Inform Assoc. 2013 Sep-Oct;20(5):954-61. doi: 10.1136/amiajnl-2012-001431. Epub 2013 Apr 10.


A hybrid system for temporal information extraction from clinical text.

Tang B, Wu Y, Jiang M, Chen Y, Denny JC, Xu H.

J Am Med Inform Assoc. 2013 Sep-Oct;20(5):828-35. doi: 10.1136/amiajnl-2013-001635. Epub 2013 Apr 9.


An end-to-end system to identify temporal relation in discharge summaries: 2012 i2b2 challenge.

Xu Y, Wang Y, Liu T, Tsujii J, Chang EI.

J Am Med Inform Assoc. 2013 Sep-Oct;20(5):849-58. doi: 10.1136/amiajnl-2012-001607. Epub 2013 Mar 6.


Natural language processing accurately categorizes findings from colonoscopy and pathology reports.

Imler TD, Morea J, Kahi C, Imperiale TF.

Clin Gastroenterol Hepatol. 2013 Jun;11(6):689-94. doi: 10.1016/j.cgh.2012.11.035. Epub 2013 Jan 11.


Chapter 13: Mining electronic health records in the genomics era.

Denny JC.

PLoS Comput Biol. 2012;8(12):e1002823. doi: 10.1371/journal.pcbi.1002823. Epub 2012 Dec 27.


Named entity recognition of follow-up and time information in 20,000 radiology reports.

Xu Y, Tsujii J, Chang EI.

J Am Med Inform Assoc. 2012 Sep-Oct;19(5):792-9. doi: 10.1136/amiajnl-2012-000812. Epub 2012 Jul 6.


Clinical research informatics: a conceptual perspective.

Kahn MG, Weng C.

J Am Med Inform Assoc. 2012 Jun;19(e1):e36-42. Epub 2012 Apr 20.


Portability of an algorithm to identify rheumatoid arthritis in electronic health records.

Carroll RJ, Thompson WK, Eyler AE, Mandelin AM, Cai T, Zink RM, Pacheco JA, Boomershine CS, Lasko TA, Xu H, Karlson EW, Perez RG, Gainer VS, Murphy SN, Ruderman EM, Pope RM, Plenge RM, Kho AN, Liao KP, Denny JC.

J Am Med Inform Assoc. 2012 Jun;19(e1):e162-9. Epub 2012 Feb 28.


Extracting and integrating data from entire electronic health records for detecting colorectal cancer cases.

Xu H, Fu Z, Shah A, Chen Y, Peterson NB, Chen Q, Mani S, Levy MA, Dai Q, Denny JC.

AMIA Annu Symp Proc. 2011;2011:1564-72. Epub 2011 Oct 22.


Modeling drug exposure data in electronic medical records: an application to warfarin.

Liu M, Jiang M, Kawai VK, Stein CM, Roden DM, Denny JC, Xu H.

AMIA Annu Symp Proc. 2011;2011:815-23. Epub 2011 Oct 22.


Developing a natural language processing application for measuring the quality of colonoscopy procedures.

Harkema H, Chapman WW, Saul M, Dellon ES, Schoen RE, Mehrotra A.

J Am Med Inform Assoc. 2011 Dec;18 Suppl 1:i150-6. doi: 10.1136/amiajnl-2011-000431. Epub 2011 Sep 21.

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