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Results: 1 to 20 of 24

1.

Nonequilibrium population dynamics of phenotype conversion of cancer cells.

Zhou JX, Pisco AO, Qian H, Huang S.

PLoS One. 2014 Dec 1;9(12):e110714. doi: 10.1371/journal.pone.0110714. eCollection 2014.

PMID:
25438251
[PubMed - in process]
Free PMC Article
2.

Identifying and quantifying heterogeneity in high content analysis: application of heterogeneity indices to drug discovery.

Gough AH, Chen N, Shun TY, Lezon TR, Boltz RC, Reese CE, Wagner J, Vernetti LA, Grandis JR, Lee AV, Stern AM, Schurdak ME, Taylor DL.

PLoS One. 2014 Jul 18;9(7):e102678. doi: 10.1371/journal.pone.0102678. eCollection 2014.

PMID:
25036749
[PubMed - in process]
Free PMC Article
3.

Inferring clonal composition from multiple sections of a breast cancer.

Zare H, Wang J, Hu A, Weber K, Smith J, Nickerson D, Song C, Witten D, Blau CA, Noble WS.

PLoS Comput Biol. 2014 Jul 10;10(7):e1003703. doi: 10.1371/journal.pcbi.1003703. eCollection 2014 Jul.

PMID:
25010360
[PubMed - in process]
Free PMC Article
4.

ODE constrained mixture modelling: a method for unraveling subpopulation structures and dynamics.

Hasenauer J, Hasenauer C, Hucho T, Theis FJ.

PLoS Comput Biol. 2014 Jul 3;10(7):e1003686. doi: 10.1371/journal.pcbi.1003686. eCollection 2014 Jul.

PMID:
24992156
[PubMed - in process]
Free PMC Article
5.

Quantitative characterization of cellular membrane-receptor heterogeneity through statistical and computational modeling.

Weddell JC, Imoukhuede PI.

PLoS One. 2014 May 14;9(5):e97271. doi: 10.1371/journal.pone.0097271. eCollection 2014.

PMID:
24827582
[PubMed - in process]
Free PMC Article
6.

A time- and matrix-dependent TGFBR3-JUND-KRT5 regulatory circuit in single breast epithelial cells and basal-like premalignancies.

Wang CC, Bajikar SS, Jamal L, Atkins KA, Janes KA.

Nat Cell Biol. 2014 Apr;16(4):345-56. doi: 10.1038/ncb2930. Epub 2014 Mar 23.

PMID:
24658685
[PubMed - indexed for MEDLINE]
Free PMC Article
7.

Parameterizing cell-to-cell regulatory heterogeneities via stochastic transcriptional profiles.

Bajikar SS, Fuchs C, Roller A, Theis FJ, Janes KA.

Proc Natl Acad Sci U S A. 2014 Feb 4;111(5):E626-35. doi: 10.1073/pnas.1311647111. Epub 2014 Jan 21.

PMID:
24449900
[PubMed - indexed for MEDLINE]
Free PMC Article
8.

Cells surviving fractional killing by TRAIL exhibit transient but sustainable resistance and inflammatory phenotypes.

Flusberg DA, Roux J, Spencer SL, Sorger PK.

Mol Biol Cell. 2013 Jul;24(14):2186-200. doi: 10.1091/mbc.E12-10-0737. Epub 2013 May 22.

PMID:
23699397
[PubMed - indexed for MEDLINE]
Free PMC Article
9.

Chapter 17: bioimage informatics for systems pharmacology.

Li F, Yin Z, Jin G, Zhao H, Wong ST.

PLoS Comput Biol. 2013 Apr;9(4):e1003043. doi: 10.1371/journal.pcbi.1003043. Epub 2013 Apr 25. Review.

PMID:
23633943
[PubMed - indexed for MEDLINE]
Free PMC Article
10.

Microfluidic chemical cytometry of peptide degradation in single drug-treated acute myeloid leukemia cells.

Kovarik ML, Shah PK, Armistead PM, Allbritton NL.

Anal Chem. 2013 May 21;85(10):4991-7. doi: 10.1021/ac4002029. Epub 2013 May 2.

PMID:
23590517
[PubMed - indexed for MEDLINE]
Free PMC Article
11.

Characterizing the relationship between steady state and response using analytical expressions for the steady states of mass action models.

Loriaux PM, Tesler G, Hoffmann A.

PLoS Comput Biol. 2013;9(2):e1002901. doi: 10.1371/journal.pcbi.1002901. Epub 2013 Feb 28.

PMID:
23509437
[PubMed - indexed for MEDLINE]
Free PMC Article
12.

Molecular heterogeneity in malignant peripheral nerve sheath tumors associated with neurofibromatosis type 1.

Thomas L, Mautner VF, Cooper DN, Upadhyaya M.

Hum Genomics. 2012 Sep 4;6:18. doi: 10.1186/1479-7364-6-18.

PMID:
23244685
[PubMed - indexed for MEDLINE]
Free PMC Article
13.

Lentiviral transduction of CD34(+) cells induces genome-wide epigenetic modifications.

Yamagata Y, Parietti V, Stockholm D, Corre G, Poinsignon C, Touleimat N, Delafoy D, Besse C, Tost J, Galy A, Paldi A.

PLoS One. 2012;7(11):e48943. doi: 10.1371/journal.pone.0048943. Epub 2012 Nov 7.

PMID:
23145033
[PubMed - indexed for MEDLINE]
Free PMC Article
14.

Multiplexed mass cytometry profiling of cellular states perturbed by small-molecule regulators.

Bodenmiller B, Zunder ER, Finck R, Chen TJ, Savig ES, Bruggner RV, Simonds EF, Bendall SC, Sachs K, Krutzik PO, Nolan GP.

Nat Biotechnol. 2012 Sep;30(9):858-67.

PMID:
22902532
[PubMed - indexed for MEDLINE]
Free PMC Article
15.

A visual analytics approach for models of heterogeneous cell populations.

Hasenauer J, Heinrich J, Doszczak M, Scheurich P, Weiskopf D, Allgöwer F.

EURASIP J Bioinform Syst Biol. 2012 May 31;2012(1):4. doi: 10.1186/1687-4153-2012-4.

PMID:
22651376
[PubMed]
Free PMC Article
16.

Closed-form density-based framework for automatic detection of cellular morphology changes.

Duong T, Goud B, Schauer K.

Proc Natl Acad Sci U S A. 2012 May 29;109(22):8382-7. doi: 10.1073/pnas.1117796109. Epub 2012 May 14.

PMID:
22586080
[PubMed - indexed for MEDLINE]
Free PMC Article
17.

Single-cell analysis of population context advances RNAi screening at multiple levels.

Snijder B, Sacher R, Rämö P, Liberali P, Mench K, Wolfrum N, Burleigh L, Scott CC, Verheije MH, Mercer J, Moese S, Heger T, Theusner K, Jurgeit A, Lamparter D, Balistreri G, Schelhaas M, De Haan CA, Marjomäki V, Hyypiä T, Rottier PJ, Sodeik B, Marsh M, Gruenberg J, Amara A, Greber U, Helenius A, Pelkmans L.

Mol Syst Biol. 2012 Apr 24;8:579. doi: 10.1038/msb.2012.9.

PMID:
22531119
[PubMed - indexed for MEDLINE]
Free PMC Article
18.

Nonheritable cellular variability accelerates the evolutionary processes of cancer.

Frank SA, Rosner MR.

PLoS Biol. 2012;10(4):e1001296. doi: 10.1371/journal.pbio.1001296. Epub 2012 Apr 3.

PMID:
22509130
[PubMed - indexed for MEDLINE]
Free PMC Article
19.

Cellular noise regulons underlie fluctuations in Saccharomyces cerevisiae.

Stewart-Ornstein J, Weissman JS, El-Samad H.

Mol Cell. 2012 Feb 24;45(4):483-93. doi: 10.1016/j.molcel.2011.11.035.

PMID:
22365828
[PubMed - indexed for MEDLINE]
Free PMC Article
20.

Analysis of alternative splicing of cassette exons at single-cell level using two fluorescent proteins.

Gurskaya NG, Staroverov DB, Zhang L, Fradkov AF, Markina NM, Pereverzev AP, Lukyanov KA.

Nucleic Acids Res. 2012 Apr;40(8):e57. doi: 10.1093/nar/gkr1314. Epub 2012 Jan 17.

PMID:
22259036
[PubMed - indexed for MEDLINE]
Free PMC Article

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