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Results: 1 to 20 of 93

1.

Genome sequence of Candidatus Nitrososphaera evergladensis from group I.1b enriched from Everglades soil reveals novel genomic features of the ammonia-oxidizing archaea.

Zhalnina KV, Dias R, Leonard MT, Dorr de Quadros P, Camargo FA, Drew JC, Farmerie WG, Daroub SH, Triplett EW.

PLoS One. 2014 Jul 7;9(7):e101648. doi: 10.1371/journal.pone.0101648. eCollection 2014.

PMID:
24999826
[PubMed - in process]
Free PMC Article
2.

Pangenome evidence for extensive interdomain horizontal transfer affecting lineage core and shell genes in uncultured planktonic thaumarchaeota and euryarchaeota.

Deschamps P, Zivanovic Y, Moreira D, Rodriguez-Valera F, López-García P.

Genome Biol Evol. 2014 Jun 12;6(7):1549-63. doi: 10.1093/gbe/evu127.

PMID:
24923324
[PubMed - in process]
Free PMC Article
3.

Genomes of two new ammonia-oxidizing archaea enriched from deep marine sediments.

Park SJ, Ghai R, Martín-Cuadrado AB, Rodríguez-Valera F, Chung WH, Kwon K, Lee JH, Madsen EL, Rhee SK.

PLoS One. 2014 May 5;9(5):e96449. doi: 10.1371/journal.pone.0096449. eCollection 2014.

PMID:
24798206
[PubMed - in process]
Free PMC Article
4.

Genomic and metabolic diversity of Marine Group I Thaumarchaeota in the mesopelagic of two subtropical gyres.

Swan BK, Chaffin MD, Martinez-Garcia M, Morrison HG, Field EK, Poulton NJ, Masland ED, Harris CC, Sczyrba A, Chain PS, Koren S, Woyke T, Stepanauskas R.

PLoS One. 2014 Apr 17;9(4):e95380. doi: 10.1371/journal.pone.0095380. eCollection 2014.

PMID:
24743558
[PubMed - in process]
Free PMC Article
5.

Archaeal amoA and ureC genes and their transcriptional activity in the Arctic Ocean.

Pedneault E, Galand PE, Potvin M, Tremblay JÉ, Lovejoy C.

Sci Rep. 2014 Apr 11;4:4661. doi: 10.1038/srep04661.

PMID:
24722490
[PubMed - in process]
Free PMC Article
6.

Evidence of a putative deep sea specific microbiome in marine sponges.

Kennedy J, Flemer B, Jackson SA, Morrissey JP, O'Gara F, Dobson AD.

PLoS One. 2014 Mar 26;9(3):e91092. doi: 10.1371/journal.pone.0091092. eCollection 2014.

PMID:
24670421
[PubMed - in process]
Free PMC Article
7.

Enrichment and genome sequence of the group I.1a ammonia-oxidizing Archaeon "Ca. Nitrosotenuis uzonensis" representing a clade globally distributed in thermal habitats.

Lebedeva EV, Hatzenpichler R, Pelletier E, Schuster N, Hauzmayer S, Bulaev A, Grigor'eva NV, Galushko A, Schmid M, Palatinszky M, Le Paslier D, Daims H, Wagner M.

PLoS One. 2013 Nov 20;8(11):e80835. doi: 10.1371/journal.pone.0080835. eCollection 2013.

PMID:
24278328
[PubMed - in process]
Free PMC Article
8.

Tropical aquatic Archaea show environment-specific community composition.

Silveira CB, Cardoso AM, Coutinho FH, Lima JL, Pinto LH, Albano RM, Clementino MM, Martins OB, Vieira RP.

PLoS One. 2013 Sep 25;8(9):e76321. doi: 10.1371/journal.pone.0076321. eCollection 2013.

PMID:
24086729
[PubMed - indexed for MEDLINE]
Free PMC Article
9.

Energy-mediated vs. ammonium-regulated gene expression in the obligate ammonia-oxidizing bacterium, Nitrosococcus oceani.

Stein LY, Campbell MA, Klotz MG.

Front Microbiol. 2013 Sep 13;4:277. doi: 10.3389/fmicb.2013.00277. eCollection 2013.

PMID:
24062734
[PubMed]
Free PMC Article
10.

Archaea dominate ammonia oxidizers in the permian water ecosystem of midland basin.

Hong Y, Youshao W, Chen F.

Microbes Environ. 2013;28(3):396-9. Epub 2013 Sep 4.

PMID:
24005842
[PubMed - indexed for MEDLINE]
Free PMC Article
11.

Transcriptional response of the archaeal ammonia oxidizer Nitrosopumilus maritimus to low and environmentally relevant ammonia concentrations.

Nakagawa T, Stahl DA.

Appl Environ Microbiol. 2013 Nov;79(22):6911-6. doi: 10.1128/AEM.02028-13. Epub 2013 Aug 30.

PMID:
23995944
[PubMed - indexed for MEDLINE]
Free PMC Article
12.

New insights into hydrothermal vent processes in the unique shallow-submarine arc-volcano, Kolumbo (Santorini), Greece.

Kilias SP, Nomikou P, Papanikolaou D, Polymenakou PN, Godelitsas A, Argyraki A, Carey S, Gamaletsos P, Mertzimekis TJ, Stathopoulou E, Goettlicher J, Steininger R, Betzelou K, Livanos I, Christakis C, Bell KC, Scoullos M.

Sci Rep. 2013;3:2421. doi: 10.1038/srep02421.

PMID:
23939372
[PubMed - indexed for MEDLINE]
Free PMC Article
13.

The Nitrosopumilus maritimus CdvB, but not FtsZ, assembles into polymers.

Ng KH, Srinivas V, Srinivasan R, Balasubramanian M.

Archaea. 2013;2013:104147. doi: 10.1155/2013/104147. Epub 2013 Jun 2.

PMID:
23818813
[PubMed - indexed for MEDLINE]
Free PMC Article
14.

Microbial communities associated with ferromanganese nodules and the surrounding sediments.

Tully BJ, Heidelberg JF.

Front Microbiol. 2013 Jun 25;4:161. doi: 10.3389/fmicb.2013.00161. eCollection 2013.

PMID:
23805131
[PubMed]
Free PMC Article
15.

Phylogenetic and Functional Analysis of Metagenome Sequence from High-Temperature Archaeal Habitats Demonstrate Linkages between Metabolic Potential and Geochemistry.

Inskeep WP, Jay ZJ, Herrgard MJ, Kozubal MA, Rusch DB, Tringe SG, Macur RE, Jennings Rd, Boyd ES, Spear JR, Roberto FF.

Front Microbiol. 2013 May 15;4:95. doi: 10.3389/fmicb.2013.00095. eCollection 2013.

PMID:
23720654
[PubMed]
Free PMC Article
16.

Mechanism for nitrogen isotope fractionation during ammonium assimilation by Escherichia coli K12.

Vo J, Inwood W, Hayes JM, Kustu S.

Proc Natl Acad Sci U S A. 2013 May 21;110(21):8696-701. doi: 10.1073/pnas.1216683110. Epub 2013 May 6.

PMID:
23650377
[PubMed - indexed for MEDLINE]
Free PMC Article
17.

An analysis of thaumarchaeota populations from the northern gulf of Mexico.

Tolar BB, King GM, Hollibaugh JT.

Front Microbiol. 2013 Apr 9;4:72. doi: 10.3389/fmicb.2013.00072. eCollection 2013.

PMID:
23577005
[PubMed]
Free PMC Article
18.

Dynamics of autotrophic marine planktonic thaumarchaeota in the East China Sea.

Hu A, Yang Z, Yu CP, Jiao N.

PLoS One. 2013;8(4):e61087. doi: 10.1371/journal.pone.0061087. Epub 2013 Apr 2.

PMID:
23565298
[PubMed - indexed for MEDLINE]
Free PMC Article
19.

The molecular basis of K+ exclusion by the Escherichia coli ammonium channel AmtB.

Hall JA, Yan D.

J Biol Chem. 2013 May 17;288(20):14080-6. doi: 10.1074/jbc.M113.457952. Epub 2013 Apr 1.

PMID:
23546877
[PubMed - indexed for MEDLINE]
Free PMC Article
20.

Structure of the rare archaeal biosphere and seasonal dynamics of active ecotypes in surface coastal waters.

Hugoni M, Taib N, Debroas D, Domaizon I, Jouan Dufournel I, Bronner G, Salter I, Agogué H, Mary I, Galand PE.

Proc Natl Acad Sci U S A. 2013 Apr 9;110(15):6004-9. doi: 10.1073/pnas.1216863110. Epub 2013 Mar 27.

PMID:
23536290
[PubMed - indexed for MEDLINE]
Free PMC Article

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