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Results: 1 to 20 of 41

1.

Allopolyploidy, diversification, and the Miocene grassland expansion.

Estep MC, McKain MR, Vela Diaz D, Zhong J, Hodge JG, Hodkinson TR, Layton DJ, Malcomber ST, Pasquet R, Kellogg EA.

Proc Natl Acad Sci U S A. 2014 Oct 21;111(42):15149-54. doi: 10.1073/pnas.1404177111. Epub 2014 Oct 6.

PMID:
25288748
[PubMed - in process]
Free PMC Article
2.

Adaptive evolution and divergent expression of heat stress transcription factors in grasses.

Yang Z, Wang Y, Gao Y, Zhou Y, Zhang E, Hu Y, Yuan Y, Liang G, Xu C.

BMC Evol Biol. 2014 Jun 30;14:147. doi: 10.1186/1471-2148-14-147.

PMID:
24974883
[PubMed - indexed for MEDLINE]
Free PMC Article
3.

Exploring the evolutionary route of the acquisition of betaine aldehyde dehydrogenase activity by plant ALDH10 enzymes: implications for the synthesis of the osmoprotectant glycine betaine.

Muñoz-Clares RA, Riveros-Rosas H, Garza-Ramos G, González-Segura L, Mújica-Jiménez C, Julián-Sánchez A.

BMC Plant Biol. 2014 May 29;14:149. doi: 10.1186/1471-2229-14-149.

PMID:
24884441
[PubMed - in process]
Free PMC Article
4.

Gene conversion in angiosperm genomes with an emphasis on genes duplicated by polyploidization.

Wang XY, Paterson AH.

Genes (Basel). 2011 Jan 10;2(1):1-20. doi: 10.3390/genes2010001.

PMID:
24710136
[PubMed]
Free PMC Article
5.

Genomic analysis of NAC transcription factors in banana (Musa acuminata) and definition of NAC orthologous groups for monocots and dicots.

Cenci A, Guignon V, Roux N, Rouard M.

Plant Mol Biol. 2014 May;85(1-2):63-80. doi: 10.1007/s11103-013-0169-2. Epub 2014 Feb 26.

PMID:
24570169
[PubMed - indexed for MEDLINE]
Free PMC Article
6.

Ancient gene duplicates in Gossypium (cotton) exhibit near-complete expression divergence.

Renny-Byfield S, Gallagher JP, Grover CE, Szadkowski E, Page JT, Udall JA, Wang X, Paterson AH, Wendel JF.

Genome Biol Evol. 2014 Mar;6(3):559-71. doi: 10.1093/gbe/evu037.

PMID:
24558256
[PubMed - indexed for MEDLINE]
Free PMC Article
7.

The Spirodela polyrhiza genome reveals insights into its neotenous reduction fast growth and aquatic lifestyle.

Wang W, Haberer G, Gundlach H, Gläßer C, Nussbaumer T, Luo MC, Lomsadze A, Borodovsky M, Kerstetter RA, Shanklin J, Byrant DW, Mockler TC, Appenroth KJ, Grimwood J, Jenkins J, Chow J, Choi C, Adam C, Cao XH, Fuchs J, Schubert I, Rokhsar D, Schmutz J, Michael TP, Mayer KF, Messing J.

Nat Commun. 2014;5:3311. doi: 10.1038/ncomms4311.

PMID:
24548928
[PubMed - in process]
Free PMC Article
8.

The paralogous SPX3 and SPX5 genes redundantly modulate Pi homeostasis in rice.

Shi J, Hu H, Zhang K, Zhang W, Yu Y, Wu Z, Wu P.

J Exp Bot. 2014 Mar;65(3):859-70. doi: 10.1093/jxb/ert424. Epub 2013 Dec 24.

PMID:
24368504
[PubMed - indexed for MEDLINE]
Free PMC Article
9.

Shared subgenome dominance following polyploidization explains grass genome evolutionary plasticity from a seven protochromosome ancestor with 16K protogenes.

Murat F, Zhang R, Guizard S, Flores R, Armero A, Pont C, Steinbach D, Quesneville H, Cooke R, Salse J.

Genome Biol Evol. 2014 Jan;6(1):12-33. doi: 10.1093/gbe/evt200.

PMID:
24317974
[PubMed - indexed for MEDLINE]
Free PMC Article
10.

Whole genome duplication events in plant evolution reconstructed and predicted using myosin motor proteins.

Mühlhausen S, Kollmar M.

BMC Evol Biol. 2013 Sep 22;13:202. doi: 10.1186/1471-2148-13-202.

PMID:
24053117
[PubMed - indexed for MEDLINE]
Free PMC Article
11.

A comparative genome analysis of PME and PMEI families reveals the evolution of pectin metabolism in plant cell walls.

Wang M, Yuan D, Gao W, Li Y, Tan J, Zhang X.

PLoS One. 2013 Aug 12;8(8):e72082. doi: 10.1371/journal.pone.0072082. eCollection 2013.

PMID:
23951288
[PubMed - indexed for MEDLINE]
Free PMC Article
12.

Evolution of the class IV HD-zip gene family in streptophytes.

Zalewski CS, Floyd SK, Furumizu C, Sakakibara K, Stevenson DW, Bowman JL.

Mol Biol Evol. 2013 Oct;30(10):2347-65. doi: 10.1093/molbev/mst132. Epub 2013 Jul 27.

PMID:
23894141
[PubMed - indexed for MEDLINE]
Free PMC Article
13.

Identification and characterization of two wheat Glycogen Synthase Kinase 3/ SHAGGY-like kinases.

Bittner T, Campagne S, Neuhaus G, Rensing SA, Fischer-Iglesias C.

BMC Plant Biol. 2013 Apr 18;13:64. doi: 10.1186/1471-2229-13-64.

PMID:
23594413
[PubMed - indexed for MEDLINE]
Free PMC Article
14.

Function relaxation followed by diversifying selection after whole-genome duplication in flowering plants.

Guo H, Lee TH, Wang X, Paterson AH.

Plant Physiol. 2013 Jun;162(2):769-78. doi: 10.1104/pp.112.213447. Epub 2013 Apr 11.

PMID:
23580595
[PubMed - indexed for MEDLINE]
Free PMC Article
15.

Prevalent role of gene features in determining evolutionary fates of whole-genome duplication duplicated genes in flowering plants.

Jiang WK, Liu YL, Xia EH, Gao LZ.

Plant Physiol. 2013 Apr;161(4):1844-61. doi: 10.1104/pp.112.200147. Epub 2013 Feb 8.

PMID:
23396833
[PubMed - indexed for MEDLINE]
Free PMC Article
16.

Convergent gene loss following gene and genome duplications creates single-copy families in flowering plants.

De Smet R, Adams KL, Vandepoele K, Van Montagu MC, Maere S, Van de Peer Y.

Proc Natl Acad Sci U S A. 2013 Feb 19;110(8):2898-903. doi: 10.1073/pnas.1300127110. Epub 2013 Feb 4.

PMID:
23382190
[PubMed - indexed for MEDLINE]
Free PMC Article
17.

Locally duplicated ohnologs evolve faster than nonlocally duplicated ohnologs in Arabidopsis and rice.

Wang Y.

Genome Biol Evol. 2013;5(2):362-9. doi: 10.1093/gbe/evt016.

PMID:
23362157
[PubMed - indexed for MEDLINE]
Free PMC Article
18.

Synonymous codon usage bias is correlative to intron number and shows disequilibrium among exons in plants.

Qin Z, Cai Z, Xia G, Wang M.

BMC Genomics. 2013 Jan 28;14:56. doi: 10.1186/1471-2164-14-56.

PMID:
23350908
[PubMed - indexed for MEDLINE]
Free PMC Article
19.

Discovery of MicroRNA169 gene copies in genomes of flowering plants through positional information.

Calviño M, Messing J.

Genome Biol Evol. 2013;5(2):402-17. doi: 10.1093/gbe/evt015.

PMID:
23348041
[PubMed - indexed for MEDLINE]
Free PMC Article
20.

PGDD: a database of gene and genome duplication in plants.

Lee TH, Tang H, Wang X, Paterson AH.

Nucleic Acids Res. 2013 Jan;41(Database issue):D1152-8. doi: 10.1093/nar/gks1104. Epub 2012 Nov 24.

PMID:
23180799
[PubMed - indexed for MEDLINE]
Free PMC Article
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