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Items: 1 to 20 of 56


Bioinformatics Approach in Plant Genomic Research.

Ong Q, Nguyen P, Thao NP, Le L.

Curr Genomics. 2016 Aug;17(4):368-78. doi: 10.2174/1389202917666160331202956.


Challenges of Identifying Clinically Actionable Genetic Variants for Precision Medicine.

Carter TC, He MM.

J Healthc Eng. 2016;2016. doi: 10.1155/2016/3617572.


Trimming of sequence reads alters RNA-Seq gene expression estimates.

Williams CR, Baccarella A, Parrish JZ, Kim CC.

BMC Bioinformatics. 2016 Feb 25;17:103. doi: 10.1186/s12859-016-0956-2.


Sequence-Dependent Fluorescence of Cy3- and Cy5-Labeled Double-Stranded DNA.

Kretschy N, Sack M, Somoza MM.

Bioconjug Chem. 2016 Mar 16;27(3):840-8. doi: 10.1021/acs.bioconjchem.6b00053. Epub 2016 Feb 26.


Analysis of single nucleic acid molecules in micro- and nano-fluidics.

Friedrich SM, Zec HC, Wang TH.

Lab Chip. 2016 Mar 7;16(5):790-811. doi: 10.1039/c5lc01294e. Review.


De novo sequencing and variant calling with nanopores using PoreSeq.

Szalay T, Golovchenko JA.

Nat Biotechnol. 2015 Oct;33(10):1087-91. doi: 10.1038/nbt.3360. Epub 2015 Sep 9.


Gut microbiota and allogeneic transplantation.

Wang W, Xu S, Ren Z, Jiang J, Zheng S.

J Transl Med. 2015 Aug 23;13:275. doi: 10.1186/s12967-015-0640-8. Review.


Label-free DNA sequencing using Millikan detection.

Dettloff R, Leiske D, Chow A, Farinas J.

Anal Biochem. 2015 Oct 15;487:1-7. doi: 10.1016/j.ab.2015.06.036. Epub 2015 Jul 4.


Application of metagenomics in the human gut microbiome.

Wang WL, Xu SY, Ren ZG, Tao L, Jiang JW, Zheng SS.

World J Gastroenterol. 2015 Jan 21;21(3):803-14. doi: 10.3748/wjg.v21.i3.803. Review.


Selective whole genome amplification for resequencing target microbial species from complex natural samples.

Leichty AR, Brisson D.

Genetics. 2014 Oct;198(2):473-81. doi: 10.1534/genetics.114.165498. Epub 2014 Aug 5.


Complete sequences of organelle genomes from the medicinal plant Rhazya stricta (Apocynaceae) and contrasting patterns of mitochondrial genome evolution across asterids.

Park S, Ruhlman TA, Sabir JS, Mutwakil MH, Baeshen MN, Sabir MJ, Baeshen NA, Jansen RK.

BMC Genomics. 2014 May 28;15:405. doi: 10.1186/1471-2164-15-405.


EXPRSS: an Illumina based high-throughput expression-profiling method to reveal transcriptional dynamics.

Rallapalli G, Kemen EM, Robert-Seilaniantz A, Segonzac C, Etherington GJ, Sohn KH, MacLean D, Jones JD.

BMC Genomics. 2014 May 6;15:341. doi: 10.1186/1471-2164-15-341.


Reconstruction and identification of DNA sequence landscapes from unzipping experiments at equilibrium.

Barbieri C, Cocco S, Jorg T, Monasson R.

Biophys J. 2014 Jan 21;106(2):430-9. doi: 10.1016/j.bpj.2013.11.4496.


Comparison of the sequence-dependent fluorescence of the cyanine dyes Cy3, Cy5, DyLight DY547 and DyLight DY647 on single-stranded DNA.

Kretschy N, Somoza MM.

PLoS One. 2014 Jan 15;9(1):e85605. doi: 10.1371/journal.pone.0085605. eCollection 2014.


The role of replicates for error mitigation in next-generation sequencing.

Robasky K, Lewis NE, Church GM.

Nat Rev Genet. 2014 Jan;15(1):56-62. doi: 10.1038/nrg3655. Epub 2013 Dec 10.


Single-molecule enzymology based on the principle of the Millikan oil drop experiment.

Leiske DL, Chow A, Dettloff R, Farinas J.

Anal Biochem. 2014 Mar 1;448:30-7. doi: 10.1016/j.ab.2013.11.016. Epub 2013 Nov 27.


A Benchmark Study on Error Assessment and Quality Control of CCS Reads Derived from the PacBio RS.

Jiao X, Zheng X, Ma L, Kutty G, Gogineni E, Sun Q, Sherman BT, Hu X, Jones K, Raley C, Tran B, Munroe DJ, Stephens R, Liang D, Imamichi T, Kovacs JA, Lempicki RA, Huang DW.

J Data Mining Genomics Proteomics. 2013 Jul 31;4(3). pii: 16008.


An evaluation of the PacBio RS platform for sequencing and de novo assembly of a chloroplast genome.

Ferrarini M, Moretto M, Ward JA, Šurbanovski N, Stevanović V, Giongo L, Viola R, Cavalieri D, Velasco R, Cestaro A, Sargent DJ.

BMC Genomics. 2013 Oct 1;14:670. doi: 10.1186/1471-2164-14-670.


The detection of microRNA associated with Alzheimer's disease in biological fluids using next-generation sequencing technologies.

Cheng L, Quek CY, Sun X, Bellingham SA, Hill AF.

Front Genet. 2013 Aug 8;4:150. doi: 10.3389/fgene.2013.00150. eCollection 2013.


Multiplex target capture with double-stranded DNA probes.

Shen P, Wang W, Chi AK, Fan Y, Davis RW, Scharfe C.

Genome Med. 2013 May 29;5(5):50. doi: 10.1186/gm454. eCollection 2013.

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