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Results: 18

Cited In for PubMed (Select 19892823)

1.
2.

EpiFactors: a comprehensive database of human epigenetic factors and complexes.

Medvedeva YA, Lennartsson A, Ehsani R, Kulakovskiy IV, Vorontsov IE, Panahandeh P, Khimulya G, Kasukawa T; FANTOM Consortium, Drabløs F.

Database (Oxford). 2015 Jul 7;2015:bav067. doi: 10.1093/database/bav067. Print 2015.

3.

Insights into the miRNA regulations in human disease genes.

Das J, Podder S, Ghosh TC.

BMC Genomics. 2014 Nov 21;15:1010. doi: 10.1186/1471-2164-15-1010.

4.

No more non-model species: the promise of next generation sequencing for comparative immunology.

Dheilly NM, Adema C, Raftos DA, Gourbal B, Grunau C, Du Pasquier L.

Dev Comp Immunol. 2014 Jul;45(1):56-66. doi: 10.1016/j.dci.2014.01.022. Epub 2014 Feb 6. Review.

5.

EPITRANS: a database that integrates epigenome and transcriptome data.

Cho SY, Chai JC, Park SJ, Seo H, Sohn CB, Lee YS.

Mol Cells. 2013 Nov;36(5):472-5. doi: 10.1007/s10059-013-0249-9. Epub 2013 Nov 8.

6.

PEpiD: a prostate epigenetic database in mammals.

Shi J, Hu J, Zhou Q, Du Y, Jiang C.

PLoS One. 2013 May 16;8(5):e64289. doi: 10.1371/journal.pone.0064289. Print 2013. Erratum in: PLoS One. 2013;8(10). doi:10.1371/annotation/1236c3ed-1497-4917-a083-2f5be4fab835.

7.

Online tools for bioinformatics analyses in nutrition sciences.

Malkaram SA, Hassan YI, Zempleni J.

Adv Nutr. 2012 Sep 1;3(5):654-65. doi: 10.3945/an.112.002477. Review.

8.

The chromatin fingerprint of gene enhancer elements.

Zentner GE, Scacheri PC.

J Biol Chem. 2012 Sep 7;287(37):30888-96. doi: 10.1074/jbc.R111.296491. Epub 2012 Sep 5. Review.

9.

CpG_MPs: identification of CpG methylation patterns of genomic regions from high-throughput bisulfite sequencing data.

Su J, Yan H, Wei Y, Liu H, Liu H, Wang F, Lv J, Wu Q, Zhang Y.

Nucleic Acids Res. 2013 Jan 7;41(1):e4. doi: 10.1093/nar/gks829. Epub 2012 Aug 31.

10.

HEMD: an integrated tool of human epigenetic enzymes and chemical modulators for therapeutics.

Huang Z, Jiang H, Liu X, Chen Y, Wong J, Wang Q, Huang W, Shi T, Zhang J.

PLoS One. 2012;7(6):e39917. doi: 10.1371/journal.pone.0039917. Epub 2012 Jun 25.

11.

HIstome--a relational knowledgebase of human histone proteins and histone modifying enzymes.

Khare SP, Habib F, Sharma R, Gadewal N, Gupta S, Galande S.

Nucleic Acids Res. 2012 Jan;40(Database issue):D337-42. doi: 10.1093/nar/gkr1125. Epub 2011 Dec 2.

12.

DiseaseMeth: a human disease methylation database.

Lv J, Liu H, Su J, Wu X, Liu H, Li B, Xiao X, Wang F, Wu Q, Zhang Y.

Nucleic Acids Res. 2012 Jan;40(Database issue):D1030-5. doi: 10.1093/nar/gkr1169. Epub 2011 Dec 1.

13.

Bromodomains as therapeutic targets.

Muller S, Filippakopoulos P, Knapp S.

Expert Rev Mol Med. 2011 Sep 13;13:e29. doi: 10.1017/S1462399411001992. Review.

14.

MIR@NT@N: a framework integrating transcription factors, microRNAs and their targets to identify sub-network motifs in a meta-regulation network model.

Le Béchec A, Portales-Casamar E, Vetter G, Moes M, Zindy PJ, Saumet A, Arenillas D, Theillet C, Wasserman WW, Lecellier CH, Friederich E.

BMC Bioinformatics. 2011 Mar 4;12:67. doi: 10.1186/1471-2105-12-67.

15.

QDMR: a quantitative method for identification of differentially methylated regions by entropy.

Zhang Y, Liu H, Lv J, Xiao X, Zhu J, Liu X, Su J, Li X, Wu Q, Wang F, Cui Y.

Nucleic Acids Res. 2011 May;39(9):e58. doi: 10.1093/nar/gkr053. Epub 2011 Feb 8.

16.

Discovering cooperative relationships of chromatin modifications in human T cells based on a proposed closeness measure.

Lv J, Qiao H, Liu H, Wu X, Zhu J, Su J, Wang F, Cui Y, Zhang Y.

PLoS One. 2010 Dec 3;5(12):e14219. doi: 10.1371/journal.pone.0014219.

17.

DAnCER: disease-annotated chromatin epigenetics resource.

Turinsky AL, Turner B, Borja RC, Gleeson JA, Heath M, Pu S, Switzer T, Dong D, Gong Y, On T, Xiong X, Emili A, Greenblatt J, Parkinson J, Zhang Z, Wodak SJ.

Nucleic Acids Res. 2011 Jan;39(Database issue):D889-94. doi: 10.1093/nar/gkq857. Epub 2010 Sep 28.

18.

Integrating the multiple dimensions of genomic and epigenomic landscapes of cancer.

Chari R, Thu KL, Wilson IM, Lockwood WW, Lonergan KM, Coe BP, Malloff CA, Gazdar AF, Lam S, Garnis C, MacAulay CE, Alvarez CE, Lam WL.

Cancer Metastasis Rev. 2010 Mar;29(1):73-93. doi: 10.1007/s10555-010-9199-2. Review.

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