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Items: 14


Developmental gene regulatory networks in sea urchins and what we can learn from them.

Martik ML, Lyons DC, McClay DR.

F1000Res. 2016 Feb 22;5. pii: F1000 Faculty Rev-203. doi: 10.12688/f1000research.7381.1. eCollection 2016. Review.


Comparative Developmental Transcriptomics Reveals Rewiring of a Highly Conserved Gene Regulatory Network during a Major Life History Switch in the Sea Urchin Genus Heliocidaris.

Israel JW, Martik ML, Byrne M, Raff EC, Raff RA, McClay DR, Wray GA.

PLoS Biol. 2016 Mar 4;14(3):e1002391. doi: 10.1371/journal.pbio.1002391. eCollection 2016 Mar. Erratum in: PLoS Biol. 2016 Jun;14(6):e1002489.


Molecular conservation of metazoan gut formation: evidence from expression of endomesoderm genes in Capitella teleta (Annelida).

Boyle MJ, Yamaguchi E, Seaver EC.

Evodevo. 2014 Oct 29;5:39. doi: 10.1186/2041-9139-5-39. eCollection 2014.


Multicolor labeling in developmental gene regulatory network analysis.

Sethi AJ, Angerer RC, Angerer LM.

Methods Mol Biol. 2014;1128:249-62. doi: 10.1007/978-1-62703-974-1_17.


Short-range Wnt5 signaling initiates specification of sea urchin posterior ectoderm.

McIntyre DC, Seay NW, Croce JC, McClay DR.

Development. 2013 Dec;140(24):4881-9. doi: 10.1242/dev.095844. Epub 2013 Nov 13.


The impact of gene expression variation on the robustness and evolvability of a developmental gene regulatory network.

Garfield DA, Runcie DE, Babbitt CC, Haygood R, Nielsen WJ, Wray GA.

PLoS Biol. 2013 Oct;11(10):e1001696. doi: 10.1371/journal.pbio.1001696. Epub 2013 Oct 29.


Morphogenesis in sea urchin embryos: linking cellular events to gene regulatory network states.

Lyons DC, Kaltenbach SL, McClay DR.

Wiley Interdiscip Rev Dev Biol. 2012 Mar-Apr;1(2):231-52. doi: 10.1002/wdev.18. Epub 2011 Dec 27. Review.


Rapid adaptation to food availability by a dopamine-mediated morphogenetic response.

Adams DK, Sewell MA, Angerer RC, Angerer LM.

Nat Commun. 2011 Dec 20;2:592. doi: 10.1038/ncomms1603.


The evolution of nervous system patterning: insights from sea urchin development.

Angerer LM, Yaguchi S, Angerer RC, Burke RD.

Development. 2011 Sep;138(17):3613-23. doi: 10.1242/dev.058172. Review.


Direct development of neurons within foregut endoderm of sea urchin embryos.

Wei Z, Angerer RC, Angerer LM.

Proc Natl Acad Sci U S A. 2011 May 31;108(22):9143-7. doi: 10.1073/pnas.1018513108. Epub 2011 May 16.


Modularity and design principles in the sea urchin embryo gene regulatory network.

Peter IS, Davidson EH.

FEBS Lett. 2009 Dec 17;583(24):3948-58. doi: 10.1016/j.febslet.2009.11.060. Epub . Review.


Network design principles from the sea urchin embryo.

Davidson EH.

Curr Opin Genet Dev. 2009 Dec;19(6):535-40. doi: 10.1016/j.gde.2009.10.007. Epub 2009 Nov 11. Review.


The endoderm gene regulatory network in sea urchin embryos up to mid-blastula stage.

Peter IS, Davidson EH.

Dev Biol. 2010 Apr 15;340(2):188-99. doi: 10.1016/j.ydbio.2009.10.037. Epub 2009 Nov 3.


Is Runx a linchpin for developmental signaling in metazoans?

Coffman JA.

J Cell Biochem. 2009 May 15;107(2):194-202. doi: 10.1002/jcb.22143.

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