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Items: 13

1.

Evolution of gene structural complexity: an alternative-splicing-based model accounts for intron-containing retrogenes.

Zhang C, Gschwend AR, Ouyang Y, Long M.

Plant Physiol. 2014 May;165(1):412-23. doi: 10.1104/pp.113.231696. Epub 2014 Feb 11.

2.

Genesis and regulatory wiring of retroelement-derived domesticated genes: a phylogenomic perspective.

Kokošar J, Kordiš D.

Mol Biol Evol. 2013 May;30(5):1015-31. doi: 10.1093/molbev/mst014. Epub 2013 Jan 24.

3.

"Orphan" retrogenes in the human genome.

Ciomborowska J, Rosikiewicz W, Szklarczyk D, Makałowski W, Makałowska I.

Mol Biol Evol. 2013 Feb;30(2):384-96. doi: 10.1093/molbev/mss235. Epub 2012 Oct 12.

4.

Retrogenes in rice (Oryza sativa L. ssp. japonica) exhibit correlated expression with their source genes.

Sakai H, Mizuno H, Kawahara Y, Wakimoto H, Ikawa H, Kawahigashi H, Kanamori H, Matsumoto T, Itoh T, Gaut BS.

Genome Biol Evol. 2011;3:1357-68. doi: 10.1093/gbe/evr111. Epub 2011 Oct 31.

5.

Differential expression of non-coding RNAs and continuous evolution of the X chromosome in testicular transcriptome of two mouse species.

Homolka D, Ivanek R, Forejt J, Jansa P.

PLoS One. 2011 Feb 14;6(2):e17198. doi: 10.1371/journal.pone.0017198.

6.

Evaluating the relationship between spermatogenic silencing of the X chromosome and evolution of the Y chromosome in chimpanzee and human.

Mulugeta Achame E, Baarends WM, Gribnau J, Grootegoed JA.

PLoS One. 2010 Dec 14;5(12):e15598. doi: 10.1371/journal.pone.0015598.

7.

A case-by-case evolutionary analysis of four imprinted retrogenes.

McCole RB, Loughran NB, Chahal M, Fernandes LP, Roberts RG, Fraternali F, O'Connell MJ, Oakey RJ.

Evolution. 2011 May;65(5):1413-27. doi: 10.1111/j.1558-5646.2010.01213.x. Epub 2011 Jan 10.

8.

Adaptive evolution of genes duplicated from the Drosophila pseudoobscura neo-X chromosome.

Meisel RP, Hilldorfer BB, Koch JL, Lockton S, Schaeffer SW.

Mol Biol Evol. 2010 Aug;27(8):1963-78. doi: 10.1093/molbev/msq085. Epub 2010 Mar 29.

9.

Spermatogenesis associated retrogenes are expressed in the human ovary and ovarian cancers.

Rohozinski J, Anderson ML, Broaddus RE, Edwards CL, Bishop CE.

PLoS One. 2009;4(3):e5064. doi: 10.1371/journal.pone.0005064. Epub 2009 Mar 31.

10.

Genomic landscape of developing male germ cells.

Lee TL, Pang AL, Rennert OM, Chan WY.

Birth Defects Res C Embryo Today. 2009 Mar;87(1):43-63. doi: 10.1002/bdrc.20147. Review.

11.

RNA-based gene duplication: mechanistic and evolutionary insights.

Kaessmann H, Vinckenbosch N, Long M.

Nat Rev Genet. 2009 Jan;10(1):19-31. doi: 10.1038/nrg2487. Review.

12.

Recent origins of sperm genes in Drosophila.

Dorus S, Freeman ZN, Parker ER, Heath BD, Karr TL.

Mol Biol Evol. 2008 Oct;25(10):2157-66. doi: 10.1093/molbev/msn162. Epub 2008 Jul 24.

13.

Adaptive evolution of the insulin two-gene system in mouse.

Shiao MS, Liao BY, Long M, Yu HT.

Genetics. 2008 Mar;178(3):1683-91. doi: 10.1534/genetics.108.087023. Epub 2008 Feb 1.

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