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Results: 1 to 20 of 29

1.

Computational prediction of the human-microbial oral interactome.

Coelho ED, Arrais JP, Matos S, Pereira C, Rosa N, Correia MJ, Barros M, Oliveira JL.

BMC Syst Biol. 2014 Feb 27;8:24. doi: 10.1186/1752-0509-8-24.

PMID:
24576332
[PubMed - in process]
Free PMC Article
2.

Prediction of protein-protein interaction with pairwise kernel support vector machine.

Zhang SW, Hao LY, Zhang TH.

Int J Mol Sci. 2014 Feb 21;15(2):3220-33. doi: 10.3390/ijms15023220.

PMID:
24566145
[PubMed - in process]
Free PMC Article
3.

ppiPre: predicting protein-protein interactions by combining heterogeneous features.

Deng Y, Gao L, Wang B.

BMC Syst Biol. 2013;7 Suppl 2:S8. doi: 10.1186/1752-0509-7-S2-S8. Epub 2013 Oct 14.

PMID:
24565177
[PubMed - in process]
Free PMC Article
4.

Computational Prediction of Protein-Protein Interaction Networks: Algo-rithms and Resources.

Zahiri J, Bozorgmehr JH, Masoudi-Nejad A.

Curr Genomics. 2013 Sep;14(6):397-414. doi: 10.2174/1389202911314060004.

PMID:
24396273
[PubMed]
Free PMC Article
5.

Molecular phylogeny of a RING E3 ubiquitin ligase, conserved in eukaryotic cells and dominated by homologous components, the muskelin/RanBPM/CTLH complex.

Francis O, Han F, Adams JC.

PLoS One. 2013 Oct 15;8(10):e75217. doi: 10.1371/journal.pone.0075217. eCollection 2013.

PMID:
24143168
[PubMed - indexed for MEDLINE]
Free PMC Article
6.

Predicting whole genome protein interaction networks from primary sequence data in model and non-model organisms using ENTS.

Rodgers-Melnick E, Culp M, DiFazio SP.

BMC Genomics. 2013 Sep 10;14:608. doi: 10.1186/1471-2164-14-608.

PMID:
24015873
[PubMed - in process]
Free PMC Article
7.

RanBP9 Plays a Critical Role in Neonatal Brain Development in Mice.

Palavicini JP, Lloyd BN, Hayes CD, Bianchi E, Kang DE, Dawson-Scully K, Lakshmana MK.

PLoS One. 2013 Jun 26;8(6):e66908. Print 2013.

PMID:
23840553
[PubMed - as supplied by publisher]
Free PMC Article
8.

Regulation of Hxt3 and Hxt7 turnover converges on the Vid30 complex and requires inactivation of the Ras/cAMP/PKA pathway in Saccharomyces cerevisiae.

Snowdon C, van der Merwe G.

PLoS One. 2012;7(12):e50458. doi: 10.1371/journal.pone.0050458. Epub 2012 Dec 5.

PMID:
23227176
[PubMed - indexed for MEDLINE]
Free PMC Article
9.

Exploring the topology of the Gid complex, the E3 ubiquitin ligase involved in catabolite-induced degradation of gluconeogenic enzymes.

Menssen R, Schweiggert J, Schreiner J, Kusevic D, Reuther J, Braun B, Wolf DH.

J Biol Chem. 2012 Jul 20;287(30):25602-14. doi: 10.1074/jbc.M112.363762. Epub 2012 May 29.

PMID:
22645139
[PubMed - indexed for MEDLINE]
Free PMC Article
10.

Short Co-occurring Polypeptide Regions Can Predict Global Protein Interaction Maps.

Pitre S, Hooshyar M, Schoenrock A, Samanfar B, Jessulat M, Green JR, Dehne F, Golshani A.

Sci Rep. 2012;2:239. doi: 10.1038/srep00239. Epub 2012 Jan 30.

PMID:
22355752
[PubMed]
Free PMC Article
11.

The current Salmonella-host interactome.

Schleker S, Sun J, Raghavan B, Srnec M, Müller N, Koepfinger M, Murthy L, Zhao Z, Klein-Seetharaman J.

Proteomics Clin Appl. 2012 Jan;6(1-2):117-33. doi: 10.1002/prca.201100083. Epub 2011 Dec 27. Review.

PMID:
22213674
[PubMed - indexed for MEDLINE]
Free PMC Article
12.

The promoter of filamentation (POF1) protein from Saccharomyces cerevisiae is an ATPase involved in the protein quality control process.

Costa IM, Nasser TH, Demasi M, Nascimento RM, Netto LE, Miyamoto S, Prado FM, Monteiro G.

BMC Microbiol. 2011 Dec 28;11:268. doi: 10.1186/1471-2180-11-268.

PMID:
22204397
[PubMed - indexed for MEDLINE]
Free PMC Article
13.

Simplified method to predict mutual interactions of human transcription factors based on their primary structure.

Schmeier S, Jankovic B, Bajic VB.

PLoS One. 2011;6(7):e21887. doi: 10.1371/journal.pone.0021887. Epub 2011 Jul 5.

PMID:
21750739
[PubMed - indexed for MEDLINE]
Free PMC Article
14.

Binding site prediction for protein-protein interactions and novel motif discovery using re-occurring polypeptide sequences.

Amos-Binks A, Patulea C, Pitre S, Schoenrock A, Gui Y, Green JR, Golshani A, Dehne F.

BMC Bioinformatics. 2011 Jun 2;12:225. doi: 10.1186/1471-2105-12-225.

PMID:
21635751
[PubMed - indexed for MEDLINE]
Free PMC Article
15.

CoESPRIT: a library-based construct screening method for identification and expression of soluble protein complexes.

An Y, Meresse P, Mas PJ, Hart DJ.

PLoS One. 2011 Feb 22;6(2):e16261. doi: 10.1371/journal.pone.0016261.

PMID:
21364980
[PubMed - indexed for MEDLINE]
Free PMC Article
16.

Functional classification of proteins based on projection of amino acid sequences: application for prediction of protein kinase substrates.

Sobolev B, Filimonov D, Lagunin A, Zakharov A, Koborova O, Kel A, Poroikov V.

BMC Bioinformatics. 2010 Jun 10;11:313. doi: 10.1186/1471-2105-11-313.

PMID:
20537135
[PubMed - indexed for MEDLINE]
Free PMC Article
17.

Predicting protein-protein interactions in unbalanced data using the primary structure of proteins.

Yu CY, Chou LC, Chang DT.

BMC Bioinformatics. 2010 Apr 2;11:167. doi: 10.1186/1471-2105-11-167.

PMID:
20361868
[PubMed - indexed for MEDLINE]
Free PMC Article
18.

Predicting the protein-protein interactions using primary structures with predicted protein surface.

Chang DT, Syu YT, Lin PC.

BMC Bioinformatics. 2010 Jan 18;11 Suppl 1:S3. doi: 10.1186/1471-2105-11-S1-S3.

PMID:
20122202
[PubMed - indexed for MEDLINE]
Free PMC Article
19.

Critical assessment of sequence-based protein-protein interaction prediction methods that do not require homologous protein sequences.

Park Y.

BMC Bioinformatics. 2009 Dec 14;10:419. doi: 10.1186/1471-2105-10-419.

PMID:
20003442
[PubMed - indexed for MEDLINE]
Free PMC Article
20.

Geometric de-noising of protein-protein interaction networks.

Kuchaiev O, Rasajski M, Higham DJ, Przulj N.

PLoS Comput Biol. 2009 Aug;5(8):e1000454. doi: 10.1371/journal.pcbi.1000454. Epub 2009 Aug 7.

PMID:
19662157
[PubMed - indexed for MEDLINE]
Free PMC Article

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