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Items: 1 to 20 of 31

1.

Measuring Absolute RNA Copy Numbers at High Temporal Resolution Reveals Transcriptome Kinetics in Development.

Owens ND, Blitz IL, Lane MA, Patrushev I, Overton JD, Gilchrist MJ, Cho KW, Khokha MK.

Cell Rep. 2016 Jan 26;14(3):632-47. doi: 10.1016/j.celrep.2015.12.050. Epub 2016 Jan 7.

2.

The Xenopus ORFeome: A resource that enables functional genomics.

Grant IM, Balcha D, Hao T, Shen Y, Trivedi P, Patrushev I, Fortriede JD, Karpinka JB, Liu L, Zorn AM, Stukenberg PT, Hill DE, Gilchrist MJ.

Dev Biol. 2015 Dec 15;408(2):345-57. doi: 10.1016/j.ydbio.2015.09.004. Epub 2015 Sep 29.

3.

Copy number variation and genetic diversity of MHC Class IIb alleles in an alien population of Xenopus laevis.

Mable BK, Kilbride E, Viney ME, Tinsley RC.

Immunogenetics. 2015 Oct;67(10):591-603. doi: 10.1007/s00251-015-0860-3. Epub 2015 Sep 2.

4.

Maintenance and Loss of Duplicated Genes by Dosage Subfunctionalization.

Gout JF, Lynch M.

Mol Biol Evol. 2015 Aug;32(8):2141-8. doi: 10.1093/molbev/msv095. Epub 2015 Apr 22.

5.

Comparative genomic and expression analysis of the adenosine signaling pathway members in Xenopus.

Tocco A, Pinson B, Thiébaud P, Thézé N, Massé K.

Purinergic Signal. 2015 Mar;11(1):59-77. doi: 10.1007/s11302-014-9431-6. Epub 2014 Oct 16.

6.

Differential retention and divergent resolution of duplicate genes following whole-genome duplication.

McGrath CL, Gout JF, Johri P, Doak TG, Lynch M.

Genome Res. 2014 Oct;24(10):1665-75. doi: 10.1101/gr.173740.114. Epub 2014 Aug 1.

7.

Insights into three whole-genome duplications gleaned from the Paramecium caudatum genome sequence.

McGrath CL, Gout JF, Doak TG, Yanagi A, Lynch M.

Genetics. 2014 Aug;197(4):1417-28. doi: 10.1534/genetics.114.163287. Epub 2014 May 19.

8.

A tale of two drug targets: the evolutionary history of BACE1 and BACE2.

Southan C, Hancock JM.

Front Genet. 2013 Dec 17;4:293. doi: 10.3389/fgene.2013.00293. eCollection 2013.

9.

Combining different mRNA capture methods to analyze the transcriptome: analysis of the Xenopus laevis transcriptome.

Blower MD, Jambhekar A, Schwarz DS, Toombs JA.

PLoS One. 2013 Oct 15;8(10):e77700. doi: 10.1371/journal.pone.0077700. eCollection 2013.

10.

Comprehensive transcriptome profiling and functional analysis of the frog (Bombina maxima) immune system.

Zhao F, Yan C, Wang X, Yang Y, Wang G, Lee W, Xiang Y, Zhang Y.

DNA Res. 2014 Feb;21(1):1-13. doi: 10.1093/dnares/dst035. Epub 2013 Aug 13.

11.

Homoeologous chromosomes of Xenopus laevis are highly conserved after whole-genome duplication.

Uno Y, Nishida C, Takagi C, Ueno N, Matsuda Y.

Heredity (Edinb). 2013 Nov;111(5):430-6. doi: 10.1038/hdy.2013.65. Epub 2013 Jul 3.

12.

Sequencing and analysis of full-length cDNAs, 5'-ESTs and 3'-ESTs from a cartilaginous fish, the elephant shark (Callorhinchus milii).

Tan YY, Kodzius R, Tay BH, Tay A, Brenner S, Venkatesh B.

PLoS One. 2012;7(10):e47174. doi: 10.1371/journal.pone.0047174. Epub 2012 Oct 8.

13.

RNA sequencing reveals a diverse and dynamic repertoire of the Xenopus tropicalis transcriptome over development.

Tan MH, Au KF, Yablonovitch AL, Wills AE, Chuang J, Baker JC, Wong WH, Li JB.

Genome Res. 2013 Jan;23(1):201-16. doi: 10.1101/gr.141424.112. Epub 2012 Sep 7.

14.

Xenopus tropicalis as a model organism for genetics and genomics: past, present, and future.

Grainger RM.

Methods Mol Biol. 2012;917:3-15. doi: 10.1007/978-1-61779-992-1_1.

15.

Mechanisms of Gene Duplication and Translocation and Progress towards Understanding Their Relative Contributions to Animal Genome Evolution.

Mendivil Ramos O, Ferrier DE.

Int J Evol Biol. 2012;2012:846421. doi: 10.1155/2012/846421. Epub 2012 Aug 7.

16.

Novel genes from formation to function.

Ponce R, Martinsen L, Vicente LM, Hartl DL.

Int J Evol Biol. 2012;2012:821645. doi: 10.1155/2012/821645. Epub 2012 Jul 3.

17.

From expression cloning to gene modeling: the development of Xenopus gene sequence resources.

Gilchrist MJ.

Genesis. 2012 Mar;50(3):143-54. doi: 10.1002/dvg.22008. Epub 2012 Feb 16. Review.

18.

Identification of novel microRNAs in Xenopus laevis metaphase II arrested eggs.

Ambady S, Wu Z, Dominko T.

Genesis. 2012 Mar;50(3):286-99. doi: 10.1002/dvg.22010. Epub 2012 Feb 16.

19.

The odds of duplicate gene persistence after polyploidization.

Chain FJ, Dushoff J, Evans BJ.

BMC Genomics. 2011 Dec 12;12:599. doi: 10.1186/1471-2164-12-599.

20.

A survey of small RNAs in human sperm.

Krawetz SA, Kruger A, Lalancette C, Tagett R, Anton E, Draghici S, Diamond MP.

Hum Reprod. 2011 Dec;26(12):3401-12. doi: 10.1093/humrep/der329. Epub 2011 Oct 11.

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