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Results: 1 to 20 of 25

1.

FAN1 activity on asymmetric repair intermediates is mediated by an atypical monomeric virus-type replication-repair nuclease domain.

Pennell S, Déclais AC, Li J, Haire LF, Berg W, Saldanha JW, Taylor IA, Rouse J, Lilley DM, Smerdon SJ.

Cell Rep. 2014 Jul 10;8(1):84-93. doi: 10.1016/j.celrep.2014.06.001. Epub 2014 Jun 26.

PMID:
24981866
[PubMed - in process]
Free PMC Article
2.

Essential domains of Schizosaccharomyces pombe Rad8 required for DNA damage response.

Ding L, Forsburg SL.

G3 (Bethesda). 2014 May 28;4(8):1373-84. doi: 10.1534/g3.114.011346.

PMID:
24875629
[PubMed - in process]
Free PMC Article
3.

The conserved Fanconi anemia nuclease Fan1 and the SUMO E3 ligase Pli1 act in two novel Pso2-independent pathways of DNA interstrand crosslink repair in yeast.

Fontebasso Y, Etheridge TJ, Oliver AW, Murray JM, Carr AM.

DNA Repair (Amst). 2013 Dec;12(12):1011-23. doi: 10.1016/j.dnarep.2013.10.003. Epub 2013 Nov 2.

PMID:
24192486
[PubMed - indexed for MEDLINE]
Free PMC Article
4.

Role of helicase-like transcription factor (hltf) in the G2/m transition and apoptosis in brain.

Helmer RA, Foreman O, Dertien JS, Panchoo M, Bhakta SM, Chilton BS.

PLoS One. 2013 Jun 24;8(6):e66799. doi: 10.1371/journal.pone.0066799. Print 2013.

PMID:
23826137
[PubMed - indexed for MEDLINE]
Free PMC Article
5.

Computational identification of novel biochemical systems involved in oxidation, glycosylation and other complex modifications of bases in DNA.

Iyer LM, Zhang D, Burroughs AM, Aravind L.

Nucleic Acids Res. 2013 Sep;41(16):7635-55. doi: 10.1093/nar/gkt573. Epub 2013 Jun 28.

PMID:
23814188
[PubMed - indexed for MEDLINE]
Free PMC Article
6.

A comparison of dense transposon insertion libraries in the Salmonella serovars Typhi and Typhimurium.

Barquist L, Langridge GC, Turner DJ, Phan MD, Turner AK, Bateman A, Parkhill J, Wain J, Gardner PP.

Nucleic Acids Res. 2013 Apr;41(8):4549-64. doi: 10.1093/nar/gkt148. Epub 2013 Mar 6.

PMID:
23470992
[PubMed - indexed for MEDLINE]
Free PMC Article
7.

DNA damage due to oxidative stress in Chronic Obstructive Pulmonary Disease (COPD).

Neofytou E, Tzortzaki EG, Chatziantoniou A, Siafakas NM.

Int J Mol Sci. 2012 Dec 10;13(12):16853-64. doi: 10.3390/ijms131216853.

PMID:
23222732
[PubMed - in process]
Free PMC Article
8.

Ter-dependent stress response systems: novel pathways related to metal sensing, production of a nucleoside-like metabolite, and DNA-processing.

Anantharaman V, Iyer LM, Aravind L.

Mol Biosyst. 2012 Oct 30;8(12):3142-65. doi: 10.1039/c2mb25239b.

PMID:
23044854
[PubMed - indexed for MEDLINE]
Free PMC Article
9.

Gene flow and biological conflict systems in the origin and evolution of eukaryotes.

Aravind L, Anantharaman V, Zhang D, de Souza RF, Iyer LM.

Front Cell Infect Microbiol. 2012 Jun 29;2:89. doi: 10.3389/fcimb.2012.00089. eCollection 2012.

PMID:
22919680
[PubMed - indexed for MEDLINE]
Free PMC Article
10.

Polymorphic toxin systems: Comprehensive characterization of trafficking modes, processing, mechanisms of action, immunity and ecology using comparative genomics.

Zhang D, de Souza RF, Anantharaman V, Iyer LM, Aravind L.

Biol Direct. 2012 Jun 25;7:18. doi: 10.1186/1745-6150-7-18.

PMID:
22731697
[PubMed - indexed for MEDLINE]
Free PMC Article
11.

ATP-dependent chromatin remodeling in the DNA-damage response.

Lans H, Marteijn JA, Vermeulen W.

Epigenetics Chromatin. 2012 Jan 30;5:4. doi: 10.1186/1756-8935-5-4.

PMID:
22289628
[PubMed]
Free PMC Article
12.

Insights from the architecture of the bacterial transcription apparatus.

Iyer LM, Aravind L.

J Struct Biol. 2012 Sep;179(3):299-319. doi: 10.1016/j.jsb.2011.12.013. Epub 2011 Dec 24.

PMID:
22210308
[PubMed - indexed for MEDLINE]
Free PMC Article
13.

The HARE-HTH and associated domains: novel modules in the coordination of epigenetic DNA and protein modifications.

Aravind L, Iyer LM.

Cell Cycle. 2012 Jan 1;11(1):119-31. doi: 10.4161/cc.11.1.18475. Epub 2012 Jan 1.

PMID:
22186017
[PubMed - indexed for MEDLINE]
Free PMC Article
14.

A novel immunity system for bacterial nucleic acid degrading toxins and its recruitment in various eukaryotic and DNA viral systems.

Zhang D, Iyer LM, Aravind L.

Nucleic Acids Res. 2011 Jun;39(11):4532-52. doi: 10.1093/nar/gkr036. Epub 2011 Feb 8.

PMID:
21306995
[PubMed - indexed for MEDLINE]
Free PMC Article
15.

RAD5A, RECQ4A, and MUS81 have specific functions in homologous recombination and define different pathways of DNA repair in Arabidopsis thaliana.

Mannuss A, Dukowic-Schulze S, Suer S, Hartung F, Pacher M, Puchta H.

Plant Cell. 2010 Oct;22(10):3318-30. doi: 10.1105/tpc.110.078568. Epub 2010 Oct 22.

PMID:
20971895
[PubMed - indexed for MEDLINE]
Free PMC Article
16.

Identification of KIAA1018/FAN1, a DNA repair nuclease recruited to DNA damage by monoubiquitinated FANCD2.

MacKay C, Déclais AC, Lundin C, Agostinho A, Deans AJ, MacArtney TJ, Hofmann K, Gartner A, West SC, Helleday T, Lilley DM, Rouse J.

Cell. 2010 Jul 9;142(1):65-76. doi: 10.1016/j.cell.2010.06.021.

PMID:
20603015
[PubMed - indexed for MEDLINE]
Free PMC Article
17.

Prolactin-induced Jak2 phosphorylation of RUSH: a key element in Jak/RUSH signaling.

Helmer RA, Panchoo M, Dertien JS, Bhakta SM, Hewetson A, Chilton BS.

Mol Cell Endocrinol. 2010 Aug 30;325(1-2):143-9. doi: 10.1016/j.mce.2010.05.010. Epub 2010 May 26.

PMID:
20562009
[PubMed - indexed for MEDLINE]
Free PMC Article
18.

Diversity and evolution of chromatin proteins encoded by DNA viruses.

de Souza RF, Iyer LM, Aravind L.

Biochim Biophys Acta. 2010 Mar-Apr;1799(3-4):302-18. doi: 10.1016/j.bbagrm.2009.10.006. Epub 2009 Oct 28. Review.

PMID:
19878744
[PubMed - indexed for MEDLINE]
Free PMC Article
19.

Synthesis of free and proliferating cell nuclear antigen-bound polyubiquitin chains by the RING E3 ubiquitin ligase Rad5.

Carlile CM, Pickart CM, Matunis MJ, Cohen RE.

J Biol Chem. 2009 Oct 23;284(43):29326-34. doi: 10.1074/jbc.M109.043885. Epub 2009 Aug 25.

PMID:
19706603
[PubMed - indexed for MEDLINE]
Free PMC Article
20.

In silico construction of a protein interaction landscape for nucleotide excision repair.

Tran N, Qu PP, Simpson DA, Lindsey-Boltz L, Guan X, Schmitt CP, Ibrahim JG, Kaufmann WK.

Cell Biochem Biophys. 2009;53(2):101-14. doi: 10.1007/s12013-009-9042-y.

PMID:
19156361
[PubMed - indexed for MEDLINE]
Free PMC Article

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