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Items: 1 to 20 of 45

1.

Dynamics of the ternary complex formed by c-Myc interactor JPO2, transcriptional co-activator LEDGF/p75, and chromatin.

Hendrix J, van Heertum B, Vanstreels E, Daelemans D, De Rijck J.

J Biol Chem. 2014 May 2;289(18):12494-506. doi: 10.1074/jbc.M113.525964. Epub 2014 Mar 14.

2.

Measurement of three-dimensional anisotropic diffusion by multiphoton fluorescence recovery after photobleaching.

Shi C, Cisewski SE, Bell PD, Yao H.

Ann Biomed Eng. 2014 Mar;42(3):555-65. doi: 10.1007/s10439-013-0939-7. Epub 2013 Nov 19.

3.

Mutations in DNA binding and transactivation domains affect the dynamics of parvovirus NS1 protein.

Niskanen EA, Kalliolinna O, Ihalainen TO, Häkkinen M, Vihinen-Ranta M.

J Virol. 2013 Nov;87(21):11762-74. doi: 10.1128/JVI.01678-13. Epub 2013 Aug 28.

4.

Highlighting the DNA damage response with ultrashort laser pulses in the near infrared and kinetic modeling.

Ferrando-May E, Tomas M, Blumhardt P, Stöckl M, Fuchs M, Leitenstorfer A.

Front Genet. 2013 Jul 16;4:135. doi: 10.3389/fgene.2013.00135. eCollection 2013.

5.

Cell cycle-dependent binding modes of the ran exchange factor RCC1 to chromatin.

Bierbaum M, Bastiaens PI.

Biophys J. 2013 Apr 16;104(8):1642-51. doi: 10.1016/j.bpj.2013.03.024.

6.

Dissection of cell cycle-dependent dynamics of Dnmt1 by FRAP and diffusion-coupled modeling.

Schneider K, Fuchs C, Dobay A, Rottach A, Qin W, Wolf P, Álvarez-Castro JM, Nalaskowski MM, Kremmer E, Schmid V, Leonhardt H, Schermelleh L.

Nucleic Acids Res. 2013 May;41(9):4860-76. doi: 10.1093/nar/gkt191. Epub 2013 Mar 27.

7.

Single-molecule imaging of transcription factor binding to DNA in live mammalian cells.

Gebhardt JC, Suter DM, Roy R, Zhao ZW, Chapman AR, Basu S, Maniatis T, Xie XS.

Nat Methods. 2013 May;10(5):421-6. doi: 10.1038/nmeth.2411. Epub 2013 Mar 24.

8.

Spatiotemporal dynamics of early DNA damage response proteins on complex DNA lesions.

Tobias F, Löb D, Lengert N, Durante M, Drossel B, Taucher-Scholz G, Jakob B.

PLoS One. 2013;8(2):e57953. doi: 10.1371/journal.pone.0057953. Epub 2013 Feb 26.

9.

Optical Methods to Study Protein-DNA Interactions in Vitro and in Living Cells at the Single-Molecule Level.

Monico C, Capitanio M, Belcastro G, Vanzi F, Pavone FS.

Int J Mol Sci. 2013 Feb 18;14(2):3961-92. doi: 10.3390/ijms14023961.

10.

Quantifying transient binding of ISWI chromatin remodelers in living cells by pixel-wise photobleaching profile evolution analysis.

Erdel F, Rippe K.

Proc Natl Acad Sci U S A. 2012 Nov 20;109(47):E3221-30. doi: 10.1073/pnas.1209579109. Epub 2012 Nov 5.

11.

A fractal model for nuclear organization: current evidence and biological implications.

Bancaud A, Lavelle C, Huet S, Ellenberg J.

Nucleic Acids Res. 2012 Oct;40(18):8783-92. doi: 10.1093/nar/gks586. Epub 2012 Jul 11. Review.

12.

In vivo Polycomb kinetics and mitotic chromatin binding distinguish stem cells from differentiated cells.

Fonseca JP, Steffen PA, Müller S, Lu J, Sawicka A, Seiser C, Ringrose L.

Genes Dev. 2012 Apr 15;26(8):857-71. doi: 10.1101/gad.184648.111.

13.

Minimizing the impact of photoswitching of fluorescent proteins on FRAP analysis.

Mueller F, Morisaki T, Mazza D, McNally JG.

Biophys J. 2012 Apr 4;102(7):1656-65. doi: 10.1016/j.bpj.2012.02.029. Epub 2012 Apr 3.

14.

Protein diffusion in mammalian cell cytoplasm.

Kühn T, Ihalainen TO, Hyväluoma J, Dross N, Willman SF, Langowski J, Vihinen-Ranta M, Timonen J.

PLoS One. 2011;6(8):e22962. doi: 10.1371/journal.pone.0022962. Epub 2011 Aug 19.

15.

Nuclear physics: quantitative single-cell approaches to nuclear organization and gene expression.

Lionnet T, Wu B, Grünwald D, Singer RH, Larson DR.

Cold Spring Harb Symp Quant Biol. 2010;75:113-26. doi: 10.1101/sqb.2010.75.057. Epub 2011 Apr 18.

16.

Nucleocytoplasmic distribution is required for activation of resistance by the potato NB-LRR receptor Rx1 and is balanced by its functional domains.

Slootweg E, Roosien J, Spiridon LN, Petrescu AJ, Tameling W, Joosten M, Pomp R, van Schaik C, Dees R, Borst JW, Smant G, Schots A, Bakker J, Goverse A.

Plant Cell. 2010 Dec;22(12):4195-215. doi: 10.1105/tpc.110.077537. Epub 2010 Dec 21.

17.

Cross-validating FRAP and FCS to quantify the impact of photobleaching on in vivo binding estimates.

Stasevich TJ, Mueller F, Michelman-Ribeiro A, Rosales T, Knutson JR, McNally JG.

Biophys J. 2010 Nov 3;99(9):3093-101. doi: 10.1016/j.bpj.2010.08.059.

18.

A quantitative approach to analyze binding diffusion kinetics by confocal FRAP.

Kang M, Day CA, DiBenedetto E, Kenworthy AK.

Biophys J. 2010 Nov 3;99(9):2737-47. doi: 10.1016/j.bpj.2010.09.013.

19.

The transcriptional co-activator LEDGF/p75 displays a dynamic scan-and-lock mechanism for chromatin tethering.

Hendrix J, Gijsbers R, De Rijck J, Voet A, Hotta J, McNeely M, Hofkens J, Debyser Z, Engelborghs Y.

Nucleic Acids Res. 2011 Mar;39(4):1310-25. doi: 10.1093/nar/gkq933. Epub 2010 Oct 25.

20.

FRAP analysis of membrane-associated proteins: lateral diffusion and membrane-cytoplasmic exchange.

Goehring NW, Chowdhury D, Hyman AA, Grill SW.

Biophys J. 2010 Oct 20;99(8):2443-52. doi: 10.1016/j.bpj.2010.08.033.

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