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Cited In for PubMed (Select 16141073)


Exploring Differentially Expressed Genes and Natural Antisense Transcripts in Sheep (Ovis aries) Skin with Different Wool Fiber Diameters by Digital Gene Expression Profiling.

Yue Y, Guo T, Liu J, Guo J, Yuan C, Feng R, Niu C, Sun X, Yang B.

PLoS One. 2015 Jun 15;10(6):e0129249. doi: 10.1371/journal.pone.0129249. eCollection 2015.


The landscape of antisense gene expression in human cancers.

Balbin OA, Malik R, Dhanasekaran SM, Prensner JR, Cao X, Wu YM, Robinson D, Wang R, Chen G, Beer DG, Nesvizhskii AI, Chinnaiyan AM.

Genome Res. 2015 Jul;25(7):1068-1079. Epub 2015 Jun 10.


Regulation of Nav1.7: A Conserved SCN9A Natural Antisense Transcript Expressed in Dorsal Root Ganglia.

Koenig J, Werdehausen R, Linley JE, Habib AM, Vernon J, Lolignier S, Eijkelkamp N, Zhao J, Okorokov AL, Woods CG, Wood JN, Cox JJ.

PLoS One. 2015 Jun 2;10(6):e0128830. doi: 10.1371/journal.pone.0128830. eCollection 2015.


SINEUPs are modular antisense long non-coding RNAs that increase synthesis of target proteins in cells.

Zucchelli S, Fasolo F, Russo R, Cimatti L, Patrucco L, Takahashi H, Jones MH, Santoro C, Sblattero D, Cotella D, Persichetti F, Carninci P, Gustincich S.

Front Cell Neurosci. 2015 May 13;9:174. doi: 10.3389/fncel.2015.00174. eCollection 2015.


Contrasting expression patterns of coding and noncoding parts of the human genome upon oxidative stress.

Giannakakis A, Zhang J, Jenjaroenpun P, Nama S, Zainolabidin N, Aau MY, Yarmishyn AA, Vaz C, Ivshina AV, Grinchuk OV, Voorhoeve M, Vardy LA, Sampath P, Kuznetsov VA, Kurochkin IV, Guccione E.

Sci Rep. 2015 May 29;5:9737. doi: 10.1038/srep09737.


Hypothesis: Artifacts, Including Spurious Chimeric RNAs with a Short Homologous Sequence, Caused by Consecutive Reverse Transcriptions and Endogenous Random Primers.

Peng Z, Yuan C, Zellmer L, Liu S, Xu N, Liao DJ.

J Cancer. 2015 May 1;6(6):555-67. doi: 10.7150/jca.11997. eCollection 2015. Review.


Antisense RNA Controls LRP1 Sense Transcript Expression through Interaction with a Chromatin-Associated Protein, HMGB2.

Yamanaka Y, Faghihi MA, Magistri M, Alvarez-Garcia O, Lotz M, Wahlestedt C.

Cell Rep. 2015 May 12;11(6):967-76. doi: 10.1016/j.celrep.2015.04.011. Epub 2015 Apr 30.


Long Intergenic Non-Coding RNAs: Novel Drivers of Human Lymphocyte Differentiation.

Panzeri I, Rossetti G, Abrignani S, Pagani M.

Front Immunol. 2015 Apr 15;6:175. doi: 10.3389/fimmu.2015.00175. eCollection 2015. Review.


Learning-induced gene expression in the heads of two Nasonia species that differ in long-term memory formation.

Hoedjes KM, Smid HM, Schijlen EG, Vet LE, van Vugt JJ.

BMC Genomics. 2015 Mar 10;16:162. doi: 10.1186/s12864-015-1355-1.


Methamphetamine induces alterations in the long non-coding RNAs expression profile in the nucleus accumbens of the mouse.

Zhu L, Zhu J, Liu Y, Chen Y, Li Y, Huang L, Chen S, Li T, Dang Y, Chen T.

BMC Neurosci. 2015 Mar 25;16:18. doi: 10.1186/s12868-015-0157-3.


Expression analysis of the long non-coding RNA antisense to Uchl1 (AS Uchl1) during dopaminergic cells' differentiation in vitro and in neurochemical models of Parkinson's disease.

Carrieri C, Forrest AR, Santoro C, Persichetti F, Carninci P, Zucchelli S, Gustincich S.

Front Cell Neurosci. 2015 Apr 1;9:114. doi: 10.3389/fncel.2015.00114. eCollection 2015.


The Landscape of long noncoding RNA classification.

St Laurent G, Wahlestedt C, Kapranov P.

Trends Genet. 2015 May;31(5):239-51. doi: 10.1016/j.tig.2015.03.007. Epub 2015 Apr 10. Review.


A cost-effective RNA sequencing protocol for large-scale gene expression studies.

Hou Z, Jiang P, Swanson SA, Elwell AL, Nguyen BK, Bolin JM, Stewart R, Thomson JA.

Sci Rep. 2015 Apr 1;5:9570. doi: 10.1038/srep09570.


Genome-wide identification, characterization and evolutionary analysis of long intergenic noncoding RNAs in cucumber.

Hao Z, Fan C, Cheng T, Su Y, Wei Q, Li G.

PLoS One. 2015 Mar 23;10(3):e0121800. doi: 10.1371/journal.pone.0121800. eCollection 2015.


IAOseq: inferring abundance of overlapping genes using RNA-seq data.

Sun H, Yang S, Tun L, Li Y.

BMC Bioinformatics. 2015;16 Suppl 1:S3. doi: 10.1186/1471-2105-16-S1-S3. Epub 2015 Jan 21.


Three-dimensional regulation of transcription.

Cao J, Luo Z, Cheng Q, Xu Q, Zhang Y, Wang F, Wu Y, Song X.

Protein Cell. 2015 Apr;6(4):241-53. doi: 10.1007/s13238-015-0135-7. Epub 2015 Feb 12.


Neighboring gene regulation by antisense long non-coding RNAs.

Villegas VE, Zaphiropoulos PG.

Int J Mol Sci. 2015 Feb 3;16(2):3251-66. doi: 10.3390/ijms16023251. Review.


Human promoters are intrinsically directional.

Duttke SH, Lacadie SA, Ibrahim MM, Glass CK, Corcoran DL, Benner C, Heinz S, Kadonaga JT, Ohler U.

Mol Cell. 2015 Feb 19;57(4):674-84. doi: 10.1016/j.molcel.2014.12.029. Epub 2015 Jan 29.


Non-coding RNAs in lung cancer.

Ricciuti B, Mecca C, Crinò L, Baglivo S, Cenci M, Metro G.

Oncoscience. 2014 Nov 15;1(11):674-705. eCollection 2014. Review.


Immune screening identifies novel T cell targets encoded by antisense reading frames of HIV-1.

Berger CT, Llano A, Carlson JM, Brumme ZL, Brockman MA, Cedeño S, Harrigan PR, Kaufmann DE, Heckerman D, Meyerhans A, Brander C.

J Virol. 2015 Apr;89(7):4015-9. doi: 10.1128/JVI.03435-14. Epub 2015 Jan 14.

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