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Cited In for PubMed (Select 16093310)


A highly efficient approach to protein interactome mapping based on collaborative filtering framework.

Luo X, You Z, Zhou M, Li S, Leung H, Xia Y, Zhu Q.

Sci Rep. 2015 Jan 9;5:7702. doi: 10.1038/srep07702.


NTPDASE4 gene products cooperate with the adenovirus E4orf4 protein through PP2A-dependent and -independent mechanisms and contribute to induction of cell death.

Avital-Shacham M, Sharf R, Kleinberger T.

J Virol. 2014 Jun;88(11):6318-28. doi: 10.1128/JVI.00381-14. Epub 2014 Mar 26.


Computational prediction of the human-microbial oral interactome.

Coelho ED, Arrais JP, Matos S, Pereira C, Rosa N, Correia MJ, Barros M, Oliveira JL.

BMC Syst Biol. 2014 Feb 27;8:24. doi: 10.1186/1752-0509-8-24.


First step of glycosylphosphatidylinositol (GPI) biosynthesis cross-talks with ergosterol biosynthesis and Ras signaling in Candida albicans.

Yadav B, Bhatnagar S, Ahmad MF, Jain P, Pratyusha VA, Kumar P, Komath SS.

J Biol Chem. 2014 Feb 7;289(6):3365-82. doi: 10.1074/jbc.M113.528802. Epub 2013 Dec 19.


Probability weighted ensemble transfer learning for predicting interactions between HIV-1 and human proteins.

Mei S.

PLoS One. 2013 Nov 18;8(11):e79606. doi: 10.1371/journal.pone.0079606. eCollection 2013.


An extracellular interactome of immunoglobulin and LRR proteins reveals receptor-ligand networks.

Özkan E, Carrillo RA, Eastman CL, Weiszmann R, Waghray D, Johnson KG, Zinn K, Celniker SE, Garcia KC.

Cell. 2013 Jul 3;154(1):228-39. doi: 10.1016/j.cell.2013.06.006.


A comprehensive strategy to identify stoichiometric membrane protein interactomes.

Gokhale A, Perez-Cornejo P, Duran C, Hartzell HC, Faundez V.

Cell Logist. 2012 Oct 1;2(4):189-196.


The divergence, actions, roles, and relatives of sodium-coupled bicarbonate transporters.

Parker MD, Boron WF.

Physiol Rev. 2013 Apr;93(2):803-959. doi: 10.1152/physrev.00023.2012. Review.


Quantitative residue-level structure-evolution relationships in the yeast membrane proteome.

Franzosa EA, Xue R, Xia Y.

Genome Biol Evol. 2013;5(4):734-44. doi: 10.1093/gbe/evt039.


A fluorescent reporter for mapping cellular protein-protein interactions in time and space.

Moreno D, Neller J, Kestler HA, Kraus J, Dünkler A, Johnsson N.

Mol Syst Biol. 2013;9:647. doi: 10.1038/msb.2013.3.


The yeast eukaryotic translation initiation factor 2B translation initiation complex interacts with the fatty acid synthesis enzyme YBR159W and endoplasmic reticulum membranes.

Browne CM, Samir P, Fites JS, Villarreal SA, Link AJ.

Mol Cell Biol. 2013 Mar;33(5):1041-56. doi: 10.1128/MCB.00811-12. Epub 2012 Dec 21.


Systems analysis of plant functional, transcriptional, physical interaction, and metabolic networks.

Bassel GW, Gaudinier A, Brady SM, Hennig L, Rhee SY, De Smet I.

Plant Cell. 2012 Oct;24(10):3859-75. doi: 10.1105/tpc.112.100776. Epub 2012 Oct 30. Review.


Integrity and function of the Saccharomyces cerevisiae spindle pole body depends on connections between the membrane proteins Ndc1, Rtn1, and Yop1.

Casey AK, Dawson TR, Chen J, Friederichs JM, Jaspersen SL, Wente SR.

Genetics. 2012 Oct;192(2):441-55. doi: 10.1534/genetics.112.141465. Epub 2012 Jul 13.


Uncovering Arabidopsis membrane protein interactome enriched in transporters using mating-based split ubiquitin assays and classification models.

Chen J, Lalonde S, Obrdlik P, Noorani Vatani A, Parsa SA, Vilarino C, Revuelta JL, Frommer WB, Rhee SY.

Front Plant Sci. 2012 Jun 21;3:124. doi: 10.3389/fpls.2012.00124. eCollection 2012.


Diversity in genetic in vivo methods for protein-protein interaction studies: from the yeast two-hybrid system to the mammalian split-luciferase system.

Stynen B, Tournu H, Tavernier J, Van Dijck P.

Microbiol Mol Biol Rev. 2012 Jun;76(2):331-82. doi: 10.1128/MMBR.05021-11. Review.


Mathematical modeling and validation of the ergosterol pathway in Saccharomyces cerevisiae.

Alvarez-Vasquez F, Riezman H, Hannun YA, Voit EO.

PLoS One. 2011;6(12):e28344. doi: 10.1371/journal.pone.0028344. Epub 2011 Dec 14.


AGR2 gene function requires a unique endoplasmic reticulum localization motif.

Gupta A, Dong A, Lowe AW.

J Biol Chem. 2012 Feb 10;287(7):4773-82. doi: 10.1074/jbc.M111.301531. Epub 2011 Dec 19.


Removing bias against membrane proteins in interaction networks.

Brito GC, Andrews DW.

BMC Syst Biol. 2011 Oct 19;5:169. doi: 10.1186/1752-0509-5-169.


A split-ubiquitin two-hybrid screen for proteins physically interacting with the yeast amino acid transceptor Gap1 and ammonium transceptor Mep2.

Van Zeebroeck G, Kimpe M, Vandormael P, Thevelein JM.

PLoS One. 2011;6(9):e24275. doi: 10.1371/journal.pone.0024275. Epub 2011 Sep 2.


A membrane protein/signaling protein interaction network for Arabidopsis version AMPv2.

Lalonde S, Sero A, Pratelli R, Pilot G, Chen J, Sardi MI, Parsa SA, Kim DY, Acharya BR, Stein EV, Hu HC, Villiers F, Takeda K, Yang Y, Han YS, Schwacke R, Chiang W, Kato N, Loqué D, Assmann SM, Kwak JM, Schroeder JI, Rhee SY, Frommer WB.

Front Physiol. 2010 Sep 22;1:24. doi: 10.3389/fphys.2010.00024. eCollection 2010.

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