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Cited In for PubMed (Select 15826660)


Type II restriction endonucleases--a historical perspective and more.

Pingoud A, Wilson GG, Wende W.

Nucleic Acids Res. 2014 Jul;42(12):7489-527. doi: 10.1093/nar/gku447. Epub 2014 May 30. Review.


Organization of the BcgI restriction-modification protein for the cleavage of eight phosphodiester bonds in DNA.

Smith RM, Marshall JJ, Jacklin AJ, Retter SE, Halford SE, Sobott F.

Nucleic Acids Res. 2013 Jan 7;41(1):391-404. doi: 10.1093/nar/gks1023. Epub 2012 Nov 11.


Natural zinc ribbon HNH endonucleases and engineered zinc finger nicking endonuclease.

Xu SY, Gupta YK.

Nucleic Acids Res. 2013 Jan 7;41(1):378-90. doi: 10.1093/nar/gks1043. Epub 2012 Nov 3.


DNA looping by FokI: the impact of twisting and bending rigidity on protein-induced looping dynamics.

Laurens N, Rusling DA, Pernstich C, Brouwer I, Halford SE, Wuite GJ.

Nucleic Acids Res. 2012 Jun;40(11):4988-97. doi: 10.1093/nar/gks184. Epub 2012 Feb 28.


Labeling DNA for single-molecule experiments: methods of labeling internal specific sequences on double-stranded DNA.

Zohar H, Muller SJ.

Nanoscale. 2011 Aug;3(8):3027-39. doi: 10.1039/c1nr10280j. Epub 2011 Jul 6. Review.


Linear nicking endonuclease-mediated strand-displacement DNA amplification.

Joneja A, Huang X.

Anal Biochem. 2011 Jul 1;414(1):58-69. doi: 10.1016/j.ab.2011.02.025. Epub 2011 Feb 20.


Degenerate sequence recognition by the monomeric restriction enzyme: single mutation converts BcnI into a strand-specific nicking endonuclease.

Kostiuk G, Sasnauskas G, Tamulaitiene G, Siksnys V.

Nucleic Acids Res. 2011 May;39(9):3744-53. doi: 10.1093/nar/gkq1351. Epub 2011 Jan 11.


Natural and engineered nicking endonucleases--from cleavage mechanism to engineering of strand-specificity.

Chan SH, Stoddard BL, Xu SY.

Nucleic Acids Res. 2011 Jan;39(1):1-18. doi: 10.1093/nar/gkq742. Epub 2010 Aug 30. Review. Erratum in: Nucleic Acids Res. 2011 Mar 1;39(5):1966.


Alteration of sequence specificity of the type IIS restriction endonuclease BtsI.

Guan S, Blanchard A, Zhang P, Zhu Z.

PLoS One. 2010 Jul 26;5(7):e11787. doi: 10.1371/journal.pone.0011787.


Engineering Nt.BtsCI and Nb.BtsCI nicking enzymes and applications in generating long overhangs.

Too PH, Zhu Z, Chan SH, Xu SY.

Nucleic Acids Res. 2010 Mar;38(4):1294-303. doi: 10.1093/nar/gkp1092. Epub 2009 Dec 2.


Engineering BspQI nicking enzymes and application of N.BspQI in DNA labeling and production of single-strand DNA.

Zhang P, Too PH, Samuelson JC, Chan SH, Vincze T, Doucette S, Bäckström S, Potamousis KD, Schramm TM, Forrest D, Schwartz DC, Xu SY.

Protein Expr Purif. 2010 Feb;69(2):226-34. doi: 10.1016/j.pep.2009.09.003. Epub 2009 Sep 9.


Generation of a nicking enzyme that stimulates site-specific gene conversion from the I-AniI LAGLIDADG homing endonuclease.

McConnell Smith A, Takeuchi R, Pellenz S, Davis L, Maizels N, Monnat RJ Jr, Stoddard BL.

Proc Natl Acad Sci U S A. 2009 Mar 31;106(13):5099-104. doi: 10.1073/pnas.0810588106. Epub 2009 Mar 10.


Targeting individual subunits of the FokI restriction endonuclease to specific DNA strands.

Sanders KL, Catto LE, Bellamy SR, Halford SE.

Nucleic Acids Res. 2009 Apr;37(7):2105-15. doi: 10.1093/nar/gkp046. Epub 2009 Feb 17.


Engineering variants of the I-SceI homing endonuclease with strand-specific and site-specific DNA-nicking activity.

Niu Y, Tenney K, Li H, Gimble FS.

J Mol Biol. 2008 Sep 26;382(1):188-202. doi: 10.1016/j.jmb.2008.07.010. Epub 2008 Jul 11.


A novel sequence-specific RNA quantification method using nicking endonuclease, dual-labeled fluorescent DNA probe, and conformation-interchangeable oligo-DNA.

Hosoda K, Matsuura T, Kita H, Ichihashi N, Tsukada K, Urabe I, Yomo T.

RNA. 2008 Mar;14(3):584-92. doi: 10.1261/rna.761708. Epub 2008 Jan 29.


Sequence specific detection of DNA using nicking endonuclease signal amplification (NESA).

Kiesling T, Cox K, Davidson EA, Dretchen K, Grater G, Hibbard S, Lasken RS, Leshin J, Skowronski E, Danielsen M.

Nucleic Acids Res. 2007;35(18):e117. Epub 2007 Sep 7.


Crystallization and preliminary X-ray diffraction analysis of the small subunit of the heterodimeric restriction endonuclease R.BspD6I.

Kachalova GS, Yunusova AK, Artyukh RI, Rogulin EA, Perevyazova TA, Zheleznaya LA, Matvienko NI, Bartunik HD.

Acta Crystallogr Sect F Struct Biol Cryst Commun. 2007 Sep 1;63(Pt 9):795-7. Epub 2007 Aug 31.


Discovery of natural nicking endonucleases Nb.BsrDI and Nb.BtsI and engineering of top-strand nicking variants from BsrDI and BtsI.

Xu SY, Zhu Z, Zhang P, Chan SH, Samuelson JC, Xiao J, Ingalls D, Wilson GG.

Nucleic Acids Res. 2007;35(14):4608-18. Epub 2007 Jun 22.


USER friendly DNA engineering and cloning method by uracil excision.

Bitinaite J, Rubino M, Varma KH, Schildkraut I, Vaisvila R, Vaiskunaite R.

Nucleic Acids Res. 2007;35(6):1992-2002. Epub 2007 Mar 6.


A single-molecule barcoding system using nanoslits for DNA analysis.

Jo K, Dhingra DM, Odijk T, de Pablo JJ, Graham MD, Runnheim R, Forrest D, Schwartz DC.

Proc Natl Acad Sci U S A. 2007 Feb 20;104(8):2673-8. Epub 2007 Feb 12.

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