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Items: 10

1.

Computational Identification of Protein Pupylation Sites by Using Profile-Based Composition of k-Spaced Amino Acid Pairs.

Hasan MM, Zhou Y, Lu X, Li J, Song J, Zhang Z.

PLoS One. 2015 Jun 16;10(6):e0129635. doi: 10.1371/journal.pone.0129635. eCollection 2015.

2.

Systematic analysis and prediction of pupylation sites in prokaryotic proteins.

Chen X, Qiu JD, Shi SP, Suo SB, Liang RP.

PLoS One. 2013 Sep 3;8(9):e74002. doi: 10.1371/journal.pone.0074002. eCollection 2013. Review.

3.

ATP binds to proteasomal ATPases in pairs with distinct functional effects, implying an ordered reaction cycle.

Smith DM, Fraga H, Reis C, Kafri G, Goldberg AL.

Cell. 2011 Feb 18;144(4):526-38. doi: 10.1016/j.cell.2011.02.005.

4.

Characterization of cell cycle specific protein interaction networks of the yeast 26S proteasome complex by the QTAX strategy.

Kaake RM, Milenković T, Przulj N, Kaiser P, Huang L.

J Proteome Res. 2010 Apr 5;9(4):2016-29. doi: 10.1021/pr1000175.

5.

Interactions of PAN's C-termini with archaeal 20S proteasome and implications for the eukaryotic proteasome-ATPase interactions.

Yu Y, Smith DM, Kim HM, Rodriguez V, Goldberg AL, Cheng Y.

EMBO J. 2010 Feb 3;29(3):692-702. doi: 10.1038/emboj.2009.382. Epub 2009 Dec 17.

6.

Proteasome inhibitors in the treatment of multiple myeloma.

Shah JJ, Orlowski RZ.

Leukemia. 2009 Nov;23(11):1964-79. doi: 10.1038/leu.2009.173. Epub 2009 Sep 10. Review.

7.

Toward an atomic model of the 26S proteasome.

Cheng Y.

Curr Opin Struct Biol. 2009 Apr;19(2):203-8. doi: 10.1016/j.sbi.2009.02.004. Epub 2009 Mar 14. Review.

8.

Mechanism of gate opening in the 20S proteasome by the proteasomal ATPases.

Rabl J, Smith DM, Yu Y, Chang SC, Goldberg AL, Cheng Y.

Mol Cell. 2008 May 9;30(3):360-8. doi: 10.1016/j.molcel.2008.03.004.

9.

Docking of the proteasomal ATPases' carboxyl termini in the 20S proteasome's alpha ring opens the gate for substrate entry.

Smith DM, Chang SC, Park S, Finley D, Cheng Y, Goldberg AL.

Mol Cell. 2007 Sep 7;27(5):731-44.

10.

The discovery of ubiquitin-dependent proteolysis.

Wilkinson KD.

Proc Natl Acad Sci U S A. 2005 Oct 25;102(43):15280-2. Epub 2005 Oct 17.

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