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Results: 1 to 20 of 24

1.

An evaluation of high-throughput approaches to QTL mapping in Saccharomyces cerevisiae.

Wilkening S, Lin G, Fritsch ES, Tekkedil MM, Anders S, Kuehn R, Nguyen M, Aiyar RS, Proctor M, Sakhanenko NA, Galas DJ, Gagneur J, Deutschbauer A, Steinmetz LM.

Genetics. 2014 Mar;196(3):853-65. doi: 10.1534/genetics.113.160291. Epub 2013 Dec 27.

PMID:
24374355
[PubMed - in process]
Free PMC Article
2.

Predicting complex phenotype-genotype interactions to enable yeast engineering: Saccharomyces cerevisiae as a model organism and a cell factory.

Dikicioglu D, Pir P, Oliver SG.

Biotechnol J. 2013 Sep;8(9):1017-34. doi: 10.1002/biot.201300138. Epub 2013 Aug 23. Review. Erratum in: Biotechnol J. 2014 May;9(5):709.

PMID:
24031036
[PubMed - indexed for MEDLINE]
Free PMC Article
3.

Genotyping 1000 yeast strains by next-generation sequencing.

Wilkening S, Tekkedil MM, Lin G, Fritsch ES, Wei W, Gagneur J, Lazinski DW, Camilli A, Steinmetz LM.

BMC Genomics. 2013 Feb 9;14:90. doi: 10.1186/1471-2164-14-90.

PMID:
23394869
[PubMed - indexed for MEDLINE]
Free PMC Article
4.

Prokaryotic genome regulation: a revolutionary paradigm.

Ishihama A.

Proc Jpn Acad Ser B Phys Biol Sci. 2012;88(9):485-508. Review.

PMID:
23138451
[PubMed - indexed for MEDLINE]
Free PMC Article
5.

Microfluidics-based capture of human neutrophils for expression analysis in blood and bronchoalveolar lavage.

Warner EA, Kotz KT, Ungaro RF, Abouhamze AS, Lopez MC, Cuenca AG, Kelly-Scumpia KM, Moreno C, O'Malley KA, Lanz JD, Baker HV, Martin LC, Toner M, Tompkins RG, Efron PA, Moldawer LL.

Lab Invest. 2011 Dec;91(12):1787-95. doi: 10.1038/labinvest.2011.94. Epub 2011 Sep 19.

PMID:
21931299
[PubMed - indexed for MEDLINE]
Free PMC Article
6.

S. pombe genome deletion project: an update.

Spirek M, Benko Z, Carnecka M, Rumpf C, Cipak L, Batova M, Marova I, Nam M, Kim DU, Park HO, Hayles J, Hoe KL, Nurse P, Gregan J.

Cell Cycle. 2010 Jun 15;9(12):2399-402. Epub 2010 Jun 15.

PMID:
20519959
[PubMed - indexed for MEDLINE]
Free PMC Article
7.

Genetic dissection of complex traits in yeast: insights from studies of gene expression and other phenotypes in the BYxRM cross.

Ehrenreich IM, Gerke JP, Kruglyak L.

Cold Spring Harb Symp Quant Biol. 2009;74:145-53. doi: 10.1101/sqb.2009.74.013. Epub 2009 Sep 4. Review.

PMID:
19734204
[PubMed - indexed for MEDLINE]
Free PMC Article
8.

Electrostatic readout of DNA microarrays with charged microspheres.

Clack NG, Salaita K, Groves JT.

Nat Biotechnol. 2008 Jul;26(7):825-30. doi: 10.1038/nbt1416. Epub 2008 Jun 29.

PMID:
18587384
[PubMed - indexed for MEDLINE]
Free PMC Article
9.

Genome sequencing and comparative analysis of Saccharomyces cerevisiae strain YJM789.

Wei W, McCusker JH, Hyman RW, Jones T, Ning Y, Cao Z, Gu Z, Bruno D, Miranda M, Nguyen M, Wilhelmy J, Komp C, Tamse R, Wang X, Jia P, Luedi P, Oefner PJ, David L, Dietrich FS, Li Y, Davis RW, Steinmetz LM.

Proc Natl Acad Sci U S A. 2007 Jul 31;104(31):12825-30. Epub 2007 Jul 25.

PMID:
17652520
[PubMed - indexed for MEDLINE]
Free PMC Article
10.

Autocorrelation analysis reveals widespread spatial biases in microarray experiments.

Koren A, Tirosh I, Barkai N.

BMC Genomics. 2007 Jun 12;8:164.

PMID:
17565680
[PubMed - indexed for MEDLINE]
Free PMC Article
11.

Four linked genes participate in controlling sporulation efficiency in budding yeast.

Ben-Ari G, Zenvirth D, Sherman A, David L, Klutstein M, Lavi U, Hillel J, Simchen G.

PLoS Genet. 2006 Nov 17;2(11):e195. Epub 2006 Oct 6.

PMID:
17112318
[PubMed - indexed for MEDLINE]
Free PMC Article
12.

Assessing systems properties of yeast mitochondria through an interaction map of the organelle.

Perocchi F, Jensen LJ, Gagneur J, Ahting U, von Mering C, Bork P, Prokisch H, Steinmetz LM.

PLoS Genet. 2006 Oct 20;2(10):e170.

PMID:
17054397
[PubMed - indexed for MEDLINE]
Free PMC Article
13.

Data quality in genomics and microarrays.

Ji H, Davis RW.

Nat Biotechnol. 2006 Sep;24(9):1112-3. No abstract available.

PMID:
16964224
[PubMed - indexed for MEDLINE]
Free PMC Article
14.

High-resolution mutation mapping reveals parallel experimental evolution in yeast.

Segrè AV, Murray AW, Leu JY.

PLoS Biol. 2006 Jul;4(8):e256.

PMID:
16856782
[PubMed - indexed for MEDLINE]
Free PMC Article
15.

A multivariate prediction model for microarray cross-hybridization.

Chen YA, Chou CC, Lu X, Slate EH, Peck K, Xu W, Voit EO, Almeida JS.

BMC Bioinformatics. 2006 Mar 1;7:101.

PMID:
16509965
[PubMed - indexed for MEDLINE]
Free PMC Article
16.

Complex genetic interactions in a quantitative trait locus.

Sinha H, Nicholson BP, Steinmetz LM, McCusker JH.

PLoS Genet. 2006 Feb;2(2):e13. Epub 2006 Feb 3.

PMID:
16462944
[PubMed - indexed for MEDLINE]
Free PMC Article
17.

Quantitative analysis of genetic and neuronal multi-perturbation experiments.

Kaufman A, Keinan A, Meilijson I, Kupiec M, Ruppin E.

PLoS Comput Biol. 2005 Nov;1(6):e64. Epub 2005 Nov 25.

PMID:
16322764
[PubMed - indexed for MEDLINE]
Free PMC Article
18.

Loss of dispensable genes is not adaptive in yeast.

Sliwa P, Korona R.

Proc Natl Acad Sci U S A. 2005 Dec 6;102(49):17670-4. Epub 2005 Nov 28.

PMID:
16314574
[PubMed - indexed for MEDLINE]
Free PMC Article
19.

Identification of novel mammalian growth regulatory factors by genome-scale quantitative image analysis.

Harada JN, Bower KE, Orth AP, Callaway S, Nelson CG, Laris C, Hogenesch JB, Vogt PK, Chanda SK.

Genome Res. 2005 Aug;15(8):1136-44. Epub 2005 Jul 15.

PMID:
16024821
[PubMed - indexed for MEDLINE]
Free PMC Article
20.

Functional genomics thickens the biological plot.

Gewin V.

PLoS Biol. 2005 Jun;3(6):e219. Epub 2005 Jun 14. No abstract available.

PMID:
15941356
[PubMed - indexed for MEDLINE]
Free PMC Article

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