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Items: 1 to 20 of 107

1.

Integration and Fixation Preferences of Human and Mouse Endogenous Retroviruses Uncovered with Functional Data Analysis.

Campos-Sánchez R, Cremona MA, Pini A, Chiaromonte F, Makova KD.

PLoS Comput Biol. 2016 Jun 16;12(6):e1004956. doi: 10.1371/journal.pcbi.1004956. eCollection 2016 Jun.

2.

Recognition of the nucleosome by chromatin factors and enzymes.

McGinty RK, Tan S.

Curr Opin Struct Biol. 2016 Apr;37:54-61. doi: 10.1016/j.sbi.2015.11.014. Epub 2016 Jan 5. Review.

PMID:
26764865
3.

LEDGF/p75 interacts with mRNA splicing factors and targets HIV-1 integration to highly spliced genes.

Singh PK, Plumb MR, Ferris AL, Iben JR, Wu X, Fadel HJ, Luke BT, Esnault C, Poeschla EM, Hughes SH, Kvaratskhelia M, Levin HL.

Genes Dev. 2015 Nov 1;29(21):2287-97. doi: 10.1101/gad.267609.115.

4.

Host Factors in Retroviral Integration and the Selection of Integration Target Sites.

Craigie R, Bushman FD.

Microbiol Spectr. 2014 Dec;2(6). doi: 10.1128/microbiolspec.MDNA3-0026-2014. Review.

5.

DNA Physical Properties and Nucleosome Positions Are Major Determinants of HIV-1 Integrase Selectivity.

Naughtin M, Haftek-Terreau Z, Xavier J, Meyer S, Silvain M, Jaszczyszyn Y, Levy N, Miele V, Benleulmi MS, Ruff M, Parissi V, Vaillant C, Lavigne M.

PLoS One. 2015 Jun 15;10(6):e0129427. doi: 10.1371/journal.pone.0129427. eCollection 2015.

6.

Structural basis for retroviral integration into nucleosomes.

Maskell DP, Renault L, Serrao E, Lesbats P, Matadeen R, Hare S, Lindemann D, Engelman AN, Costa A, Cherepanov P.

Nature. 2015 Jul 16;523(7560):366-9. doi: 10.1038/nature14495. Epub 2015 Jun 10.

7.

Key determinants of target DNA recognition by retroviral intasomes.

Serrao E, Ballandras-Colas A, Cherepanov P, Maertens GN, Engelman AN.

Retrovirology. 2015 Apr 30;12:39. doi: 10.1186/s12977-015-0167-3.

8.

Stereochemical control of nucleosome targeting by platinum-intercalator antitumor agents.

Chua EY, Davey GE, Chin CF, Dröge P, Ang WH, Davey CA.

Nucleic Acids Res. 2015 Jun 23;43(11):5284-96. doi: 10.1093/nar/gkv356. Epub 2015 Apr 27.

9.

Intasome architecture and chromatin density modulate retroviral integration into nucleosome.

Benleulmi MS, Matysiak J, Henriquez DR, Vaillant C, Lesbats P, Calmels C, Naughtin M, Leon O, Skalka AM, Ruff M, Lavigne M, Andreola ML, Parissi V.

Retrovirology. 2015 Feb 7;12:13. doi: 10.1186/s12977-015-0145-9.

10.

Retroviral Integrase Structure and DNA Recombination Mechanism.

Engelman A, Cherepanov P.

Microbiol Spectr. 2014;2(6):1-22.

11.

Lentivector integration sites in ependymal cells from a model of metachromatic leukodystrophy: non-B DNA as a new factor influencing integration.

McAllister RG, Liu J, Woods MW, Tom SK, Rupar CA, Barr SD.

Mol Ther Nucleic Acids. 2014 Aug 26;3:e187. doi: 10.1038/mtna.2014.39.

12.

Molecular mechanisms of retroviral integration site selection.

Kvaratskhelia M, Sharma A, Larue RC, Serrao E, Engelman A.

Nucleic Acids Res. 2014;42(16):10209-25. doi: 10.1093/nar/gku769. Epub 2014 Aug 21.

13.

HTLV-1 clonality in adult T-cell leukaemia and non-malignant HTLV-1 infection.

Bangham CR, Cook LB, Melamed A.

Semin Cancer Biol. 2014 Jun;26:89-98. doi: 10.1016/j.semcancer.2013.11.003. Epub 2013 Dec 6. Review.

14.

Viral and cellular requirements for the nuclear entry of retroviral preintegration nucleoprotein complexes.

Matreyek KA, Engelman A.

Viruses. 2013 Oct 7;5(10):2483-511. doi: 10.3390/v5102483. Review.

15.

Nucleosomes affect local transformation efficiency.

Aslankoohi E, Voordeckers K, Sun H, Sanchez-Rodriguez A, van der Zande E, Marchal K, Verstrepen KJ.

Nucleic Acids Res. 2012 Oct;40(19):9506-12. doi: 10.1093/nar/gks777. Epub 2012 Aug 16.

16.

HIV DNA integration.

Craigie R, Bushman FD.

Cold Spring Harb Perspect Med. 2012 Jul;2(7):a006890. doi: 10.1101/cshperspect.a006890. Review.

17.

Retroviral vectors: post entry events and genomic alterations.

Nowrouzi A, Glimm H, von Kalle C, Schmidt M.

Viruses. 2011 May;3(5):429-55. doi: 10.3390/v3050429. Epub 2011 Apr 29. Review.

18.

Retroviral integration site selection.

Desfarges S, Ciuffi A.

Viruses. 2010 Jan;2(1):111-30. doi: 10.3390/v2010111. Epub 2010 Jan 12.

19.

HIV-1 Integrase-DNA Recognition Mechanisms.

Kessl JJ, McKee CJ, Eidahl JO, Shkriabai N, Katz A, Kvaratskhelia M.

Viruses. 2009 Dec;1(3):713-36. doi: 10.3390/v1030713. Epub 2009 Nov 5.

20.

Role of the PWWP domain of lens epithelium-derived growth factor (LEDGF)/p75 cofactor in lentiviral integration targeting.

Gijsbers R, Vets S, De Rijck J, Ocwieja KE, Ronen K, Malani N, Bushman FD, Debyser Z.

J Biol Chem. 2011 Dec 2;286(48):41812-25. doi: 10.1074/jbc.M111.255711. Epub 2011 Oct 10.

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