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Results: 1 to 20 of 91

1.

A novel nutritional predictor links microbial fastidiousness with lowered ubiquity, growth rate, and cooperativeness.

Zarecki R, Oberhardt MA, Reshef L, Gophna U, Ruppin E.

PLoS Comput Biol. 2014 Jul 17;10(7):e1003726. doi: 10.1371/journal.pcbi.1003726. eCollection 2014 Jul.

PMID:
25033033
[PubMed - in process]
Free PMC Article
2.

Marine microbial metagenomics: from individual to the environment.

Tseng CH, Tang SL.

Int J Mol Sci. 2014 May 19;15(5):8878-92. doi: 10.3390/ijms15058878.

PMID:
24857918
[PubMed - in process]
Free PMC Article
3.

Symbiotic adaptation drives genome streamlining of the cyanobacterial sponge symbiont "Candidatus Synechococcus spongiarum".

Gao ZM, Wang Y, Tian RM, Wong YH, Batang ZB, Al-Suwailem AM, Bajic VB, Qian PY.

MBio. 2014 Apr 1;5(2):e00079-14. doi: 10.1128/mBio.00079-14.

PMID:
24692632
[PubMed - in process]
Free PMC Article
4.

Strong genome-wide selection early in the evolution of Prochlorococcus resulted in a reduced genome through the loss of a large number of small effect genes.

Sun Z, Blanchard JL.

PLoS One. 2014 Mar 3;9(3):e88837. doi: 10.1371/journal.pone.0088837. eCollection 2014.

PMID:
24594762
[PubMed - in process]
Free PMC Article
5.

Pathway thermodynamics highlights kinetic obstacles in central metabolism.

Noor E, Bar-Even A, Flamholz A, Reznik E, Liebermeister W, Milo R.

PLoS Comput Biol. 2014 Feb 20;10(2):e1003483. doi: 10.1371/journal.pcbi.1003483. eCollection 2014 Feb.

PMID:
24586134
[PubMed - in process]
Free PMC Article
6.

Inverse regulation of Fe- and Ni-containing SOD genes by a Fur family regulator Nur through small RNA processed from 3'UTR of the sodF mRNA.

Kim HM, Shin JH, Cho YB, Roe JH.

Nucleic Acids Res. 2014 Feb;42(3):2003-14. doi: 10.1093/nar/gkt1071. Epub 2013 Nov 13.

PMID:
24234448
[PubMed - indexed for MEDLINE]
Free PMC Article
7.

Polynucleobacter necessarius, a model for genome reduction in both free-living and symbiotic bacteria.

Boscaro V, Felletti M, Vannini C, Ackerman MS, Chain PS, Malfatti S, Vergez LM, Shin M, Doak TG, Lynch M, Petroni G.

Proc Natl Acad Sci U S A. 2013 Nov 12;110(46):18590-5. doi: 10.1073/pnas.1316687110. Epub 2013 Oct 28.

PMID:
24167248
[PubMed - indexed for MEDLINE]
Free PMC Article
8.

Small genomes and sparse metabolisms of sediment-associated bacteria from four candidate phyla.

Kantor RS, Wrighton KC, Handley KM, Sharon I, Hug LA, Castelle CJ, Thomas BC, Banfield JF.

MBio. 2013 Oct 22;4(5):e00708-13. doi: 10.1128/mBio.00708-13.

PMID:
24149512
[PubMed - indexed for MEDLINE]
Free PMC Article
9.

Function and evolution of channels and transporters in photosynthetic membranes.

Pfeil BE, Schoefs B, Spetea C.

Cell Mol Life Sci. 2014 Mar;71(6):979-98. doi: 10.1007/s00018-013-1412-3. Epub 2013 Jul 9. Review.

PMID:
23835835
[PubMed - indexed for MEDLINE]
Free PMC Article
10.

Design and development of synthetic microbial platform cells for bioenergy.

Lee SJ, Lee SJ, Lee DW.

Front Microbiol. 2013 Apr 19;4:92. doi: 10.3389/fmicb.2013.00092. eCollection 2013.

PMID:
23626588
[PubMed]
Free PMC Article
11.

Prochlorococcus can use the Pro1404 transporter to take up glucose at nanomolar concentrations in the Atlantic Ocean.

Muñoz-Marín Mdel C, Luque I, Zubkov MV, Hill PG, Diez J, García-Fernández JM.

Proc Natl Acad Sci U S A. 2013 May 21;110(21):8597-602. doi: 10.1073/pnas.1221775110. Epub 2013 Apr 8.

PMID:
23569224
[PubMed - indexed for MEDLINE]
Free PMC Article
12.

Genome-wide analysis of putative peroxiredoxin in unicellular and filamentous cyanobacteria.

Cui H, Wang Y, Wang Y, Qin S.

BMC Evol Biol. 2012 Nov 16;12:220. doi: 10.1186/1471-2148-12-220.

PMID:
23157370
[PubMed - indexed for MEDLINE]
Free PMC Article
13.

Nutrient requirements for growth of the extreme oligotroph 'Candidatus Pelagibacter ubique' HTCC1062 on a defined medium.

Carini P, Steindler L, Beszteri S, Giovannoni SJ.

ISME J. 2013 Mar;7(3):592-602. doi: 10.1038/ismej.2012.122. Epub 2012 Oct 25.

PMID:
23096402
[PubMed - indexed for MEDLINE]
Free PMC Article
14.

Microbial lifestyle and genome signatures.

Dutta C, Paul S.

Curr Genomics. 2012 Apr;13(2):153-62.

PMID:
23024607
[PubMed]
Free PMC Article
15.

Streamlining and core genome conservation among highly divergent members of the SAR11 clade.

Grote J, Thrash JC, Huggett MJ, Landry ZC, Carini P, Giovannoni SJ, Rappé MS.

MBio. 2012 Sep 18;3(5). pii: e00252-12. doi: 10.1128/mBio.00252-12. Print 2012.

PMID:
22991429
[PubMed - indexed for MEDLINE]
Free PMC Article
16.

Ecology of uncultured Prochlorococcus clades revealed through single-cell genomics and biogeographic analysis.

Malmstrom RR, Rodrigue S, Huang KH, Kelly L, Kern SE, Thompson A, Roggensack S, Berube PM, Henn MR, Chisholm SW.

ISME J. 2013 Jan;7(1):184-98. doi: 10.1038/ismej.2012.89. Epub 2012 Aug 16.

PMID:
22895163
[PubMed - indexed for MEDLINE]
Free PMC Article
17.

Cyanobacteria of the genus prochlorothrix.

Pinevich A, Velichko N, Ivanikova N.

Front Microbiol. 2012 May 21;3:173. doi: 10.3389/fmicb.2012.00173. eCollection 2012.

PMID:
22783229
[PubMed]
Free PMC Article
18.

Detection of horizontal transfer of individual genes by anomalous oligomer frequencies.

Elhai J, Liu H, Taton A.

BMC Genomics. 2012 Jun 15;13:245. doi: 10.1186/1471-2164-13-245.

PMID:
22702893
[PubMed - indexed for MEDLINE]
Free PMC Article
19.

Comparative quantitative proteomics of prochlorococcus ecotypes to a decrease in environmental phosphate concentrations.

Fuszard MA, Wright PC, Biggs CA.

Aquat Biosyst. 2012 Mar 19;8(1):7. doi: 10.1186/2046-9063-8-7.

PMID:
22480396
[PubMed]
Free PMC Article
20.

Genomewide analysis of carotenoid cleavage dioxygenases in unicellular and filamentous cyanobacteria.

Cui H, Wang Y, Qin S.

Comp Funct Genomics. 2012;2012:164690. doi: 10.1155/2012/164690. Epub 2012 Feb 28.

PMID:
22474409
[PubMed]
Free PMC Article

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