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Results: 1 to 20 of 93

Cited In for PubMed (Select 12881430)

1.

Quantification of pre-mRNA escape rate and synergy in splicing.

Bonde MM, Voegeli S, Baudrimont A, Séraphin B, Becskei A.

Nucleic Acids Res. 2014 Nov 10;42(20):12847-60. doi: 10.1093/nar/gku1014. Epub 2014 Oct 28.

2.

The interaction of cytoplasmic poly(A)-binding protein with eukaryotic initiation factor 4G suppresses nonsense-mediated mRNA decay.

Fatscher T, Boehm V, Weiche B, Gehring NH.

RNA. 2014 Oct;20(10):1579-92. doi: 10.1261/rna.044933.114. Epub 2014 Aug 21.

3.

A novel phosphorylation-independent interaction between SMG6 and UPF1 is essential for human NMD.

Nicholson P, Josi C, Kurosawa H, Yamashita A, Mühlemann O.

Nucleic Acids Res. 2014 Aug;42(14):9217-35. doi: 10.1093/nar/gku645. Epub 2014 Jul 22.

4.

The mRNP remodeling mediated by UPF1 promotes rapid degradation of replication-dependent histone mRNA.

Choe J, Ahn SH, Kim YK.

Nucleic Acids Res. 2014 Aug;42(14):9334-49. doi: 10.1093/nar/gku610. Epub 2014 Jul 12.

5.

Identification and functional analysis of novel phosphorylation sites in the RNA surveillance protein Upf1.

Lasalde C, Rivera AV, León AJ, González-Feliciano JA, Estrella LA, Rodríguez-Cruz EN, Correa ME, Cajigas IJ, Bracho DP, Vega IE, Wilkinson MF, González CI.

Nucleic Acids Res. 2014 Feb;42(3):1916-29. doi: 10.1093/nar/gkt1049. Epub 2013 Nov 5.

6.

De novo ORFs in Drosophila are important to organismal fitness and evolved rapidly from previously non-coding sequences.

Reinhardt JA, Wanjiru BM, Brant AT, Saelao P, Begun DJ, Jones CD.

PLoS Genet. 2013;9(10):e1003860. doi: 10.1371/journal.pgen.1003860. Epub 2013 Oct 17.

7.
8.

Intra- and intermolecular regulatory interactions in Upf1, the RNA helicase central to nonsense-mediated mRNA decay in yeast.

He F, Ganesan R, Jacobson A.

Mol Cell Biol. 2013 Dec;33(23):4672-84. doi: 10.1128/MCB.01136-13. Epub 2013 Oct 7.

9.

Comparison of EJC-enhanced and EJC-independent NMD in human cells reveals two partially redundant degradation pathways.

Metze S, Herzog VA, Ruepp MD, Mühlemann O.

RNA. 2013 Oct;19(10):1432-48. doi: 10.1261/rna.038893.113. Epub 2013 Aug 20.

10.

The Upf factor complex interacts with aberrant products derived from mRNAs containing a premature termination codon and facilitates their proteasomal degradation.

Kuroha K, Ando K, Nakagawa R, Inada T.

J Biol Chem. 2013 Oct 4;288(40):28630-40. doi: 10.1074/jbc.M113.460691. Epub 2013 Aug 8.

11.

An unusual arrangement of two 14-3-3-like domains in the SMG5-SMG7 heterodimer is required for efficient nonsense-mediated mRNA decay.

Jonas S, Weichenrieder O, Izaurralde E.

Genes Dev. 2013 Jan 15;27(2):211-25. doi: 10.1101/gad.206672.112.

12.

Sounds of silence: synonymous nucleotides as a key to biological regulation and complexity.

Shabalina SA, Spiridonov NA, Kashina A.

Nucleic Acids Res. 2013 Feb 1;41(4):2073-94. doi: 10.1093/nar/gks1205. Epub 2013 Jan 4. Review.

13.

SMG5-PNRC2 is functionally dominant compared with SMG5-SMG7 in mammalian nonsense-mediated mRNA decay.

Cho H, Han S, Choe J, Park SG, Choi SS, Kim YK.

Nucleic Acids Res. 2013 Jan;41(2):1319-28. doi: 10.1093/nar/gks1222. Epub 2012 Dec 11.

14.

NMD: a multifaceted response to premature translational termination.

Kervestin S, Jacobson A.

Nat Rev Mol Cell Biol. 2012 Nov;13(11):700-12. doi: 10.1038/nrm3454. Epub 2012 Oct 17. Review.

15.

The DEAD-box helicase eIF4A: paradigm or the odd one out?

Andreou AZ, Klostermeier D.

RNA Biol. 2013 Jan;10(1):19-32. doi: 10.4161/rna.21966. Epub 2012 Sep 20. Review.

16.

Drosophila mutants show NMD pathway activity is reduced, but not eliminated, in the absence of Smg6.

Frizzell KA, Rynearson SG, Metzstein MM.

RNA. 2012 Aug;18(8):1475-86. doi: 10.1261/rna.032821.112. Epub 2012 Jun 27.

17.

A program for annotating and predicting the effects of single nucleotide polymorphisms, SnpEff: SNPs in the genome of Drosophila melanogaster strain w1118; iso-2; iso-3.

Cingolani P, Platts A, Wang le L, Coon M, Nguyen T, Wang L, Land SJ, Lu X, Ruden DM.

Fly (Austin). 2012 Apr-Jun;6(2):80-92. doi: 10.4161/fly.19695.

18.

A role for nonsense-mediated mRNA decay in plants: pathogen responses are induced in Arabidopsis thaliana NMD mutants.

Rayson S, Arciga-Reyes L, Wootton L, De Torres Zabala M, Truman W, Graham N, Grant M, Davies B.

PLoS One. 2012;7(2):e31917. doi: 10.1371/journal.pone.0031917. Epub 2012 Feb 22.

19.

The Chp1-Tas3 core is a multifunctional platform critical for gene silencing by RITS.

Schalch T, Job G, Shanker S, Partridge JF, Joshua-Tor L.

Nat Struct Mol Biol. 2011 Nov 13;18(12):1351-7. doi: 10.1038/nsmb.2151.

20.

Widespread polymorphism in the positions of stop codons in Drosophila melanogaster.

Lee YC, Reinhardt JA.

Genome Biol Evol. 2012;4(4):533-49. doi: 10.1093/gbe/evr113. Epub 2011 Nov 8.

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