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Results: 1 to 20 of 93

Cited In for PubMed (Select 12881430)


Quantification of pre-mRNA escape rate and synergy in splicing.

Bonde MM, Voegeli S, Baudrimont A, Séraphin B, Becskei A.

Nucleic Acids Res. 2014 Nov 10;42(20):12847-60. doi: 10.1093/nar/gku1014. Epub 2014 Oct 28.


The interaction of cytoplasmic poly(A)-binding protein with eukaryotic initiation factor 4G suppresses nonsense-mediated mRNA decay.

Fatscher T, Boehm V, Weiche B, Gehring NH.

RNA. 2014 Oct;20(10):1579-92. doi: 10.1261/rna.044933.114. Epub 2014 Aug 21.


A novel phosphorylation-independent interaction between SMG6 and UPF1 is essential for human NMD.

Nicholson P, Josi C, Kurosawa H, Yamashita A, Mühlemann O.

Nucleic Acids Res. 2014 Aug;42(14):9217-35. doi: 10.1093/nar/gku645. Epub 2014 Jul 22.


The mRNP remodeling mediated by UPF1 promotes rapid degradation of replication-dependent histone mRNA.

Choe J, Ahn SH, Kim YK.

Nucleic Acids Res. 2014 Aug;42(14):9334-49. doi: 10.1093/nar/gku610. Epub 2014 Jul 12.


Identification and functional analysis of novel phosphorylation sites in the RNA surveillance protein Upf1.

Lasalde C, Rivera AV, León AJ, González-Feliciano JA, Estrella LA, Rodríguez-Cruz EN, Correa ME, Cajigas IJ, Bracho DP, Vega IE, Wilkinson MF, González CI.

Nucleic Acids Res. 2014 Feb;42(3):1916-29. doi: 10.1093/nar/gkt1049. Epub 2013 Nov 5.


De novo ORFs in Drosophila are important to organismal fitness and evolved rapidly from previously non-coding sequences.

Reinhardt JA, Wanjiru BM, Brant AT, Saelao P, Begun DJ, Jones CD.

PLoS Genet. 2013;9(10):e1003860. doi: 10.1371/journal.pgen.1003860. Epub 2013 Oct 17.


Intra- and intermolecular regulatory interactions in Upf1, the RNA helicase central to nonsense-mediated mRNA decay in yeast.

He F, Ganesan R, Jacobson A.

Mol Cell Biol. 2013 Dec;33(23):4672-84. doi: 10.1128/MCB.01136-13. Epub 2013 Oct 7.


Comparison of EJC-enhanced and EJC-independent NMD in human cells reveals two partially redundant degradation pathways.

Metze S, Herzog VA, Ruepp MD, Mühlemann O.

RNA. 2013 Oct;19(10):1432-48. doi: 10.1261/rna.038893.113. Epub 2013 Aug 20.


The Upf factor complex interacts with aberrant products derived from mRNAs containing a premature termination codon and facilitates their proteasomal degradation.

Kuroha K, Ando K, Nakagawa R, Inada T.

J Biol Chem. 2013 Oct 4;288(40):28630-40. doi: 10.1074/jbc.M113.460691. Epub 2013 Aug 8.


An unusual arrangement of two 14-3-3-like domains in the SMG5-SMG7 heterodimer is required for efficient nonsense-mediated mRNA decay.

Jonas S, Weichenrieder O, Izaurralde E.

Genes Dev. 2013 Jan 15;27(2):211-25. doi: 10.1101/gad.206672.112.


Sounds of silence: synonymous nucleotides as a key to biological regulation and complexity.

Shabalina SA, Spiridonov NA, Kashina A.

Nucleic Acids Res. 2013 Feb 1;41(4):2073-94. doi: 10.1093/nar/gks1205. Epub 2013 Jan 4. Review.


SMG5-PNRC2 is functionally dominant compared with SMG5-SMG7 in mammalian nonsense-mediated mRNA decay.

Cho H, Han S, Choe J, Park SG, Choi SS, Kim YK.

Nucleic Acids Res. 2013 Jan;41(2):1319-28. doi: 10.1093/nar/gks1222. Epub 2012 Dec 11.


NMD: a multifaceted response to premature translational termination.

Kervestin S, Jacobson A.

Nat Rev Mol Cell Biol. 2012 Nov;13(11):700-12. doi: 10.1038/nrm3454. Epub 2012 Oct 17. Review.


The DEAD-box helicase eIF4A: paradigm or the odd one out?

Andreou AZ, Klostermeier D.

RNA Biol. 2013 Jan;10(1):19-32. doi: 10.4161/rna.21966. Epub 2012 Sep 20. Review.


Drosophila mutants show NMD pathway activity is reduced, but not eliminated, in the absence of Smg6.

Frizzell KA, Rynearson SG, Metzstein MM.

RNA. 2012 Aug;18(8):1475-86. doi: 10.1261/rna.032821.112. Epub 2012 Jun 27.


A program for annotating and predicting the effects of single nucleotide polymorphisms, SnpEff: SNPs in the genome of Drosophila melanogaster strain w1118; iso-2; iso-3.

Cingolani P, Platts A, Wang le L, Coon M, Nguyen T, Wang L, Land SJ, Lu X, Ruden DM.

Fly (Austin). 2012 Apr-Jun;6(2):80-92. doi: 10.4161/fly.19695.


A role for nonsense-mediated mRNA decay in plants: pathogen responses are induced in Arabidopsis thaliana NMD mutants.

Rayson S, Arciga-Reyes L, Wootton L, De Torres Zabala M, Truman W, Graham N, Grant M, Davies B.

PLoS One. 2012;7(2):e31917. doi: 10.1371/journal.pone.0031917. Epub 2012 Feb 22.


The Chp1-Tas3 core is a multifunctional platform critical for gene silencing by RITS.

Schalch T, Job G, Shanker S, Partridge JF, Joshua-Tor L.

Nat Struct Mol Biol. 2011 Nov 13;18(12):1351-7. doi: 10.1038/nsmb.2151.


Widespread polymorphism in the positions of stop codons in Drosophila melanogaster.

Lee YC, Reinhardt JA.

Genome Biol Evol. 2012;4(4):533-49. doi: 10.1093/gbe/evr113. Epub 2011 Nov 8.

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