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Items: 1 to 20 of 170

1.

B Cell Receptor Activation Predominantly Regulates AKT-mTORC1/2 Substrates Functionally Related to RNA Processing.

Mohammad DK, Ali RH, Turunen JJ, Nore BF, Smith CI.

PLoS One. 2016 Aug 3;11(8):e0160255. doi: 10.1371/journal.pone.0160255. eCollection 2016.

2.

Improvement in Protein Domain Identification Is Reached by Breaking Consensus, with the Agreement of Many Profiles and Domain Co-occurrence.

Bernardes J, Zaverucha G, Vaquero C, Carbone A.

PLoS Comput Biol. 2016 Jul 29;12(7):e1005038. doi: 10.1371/journal.pcbi.1005038. eCollection 2016 Jul.

3.

Functional and Evolutionary Characterization of a Gene Transfer Agent's Multilocus "Genome".

Hynes AP, Shakya M, Mercer RG, Grüll MP, Bown L, Davidson F, Steffen E, Matchem H, Peach ME, Berger T, Grebe K, Zhaxybayeva O, Lang AS.

Mol Biol Evol. 2016 Oct;33(10):2530-43. doi: 10.1093/molbev/msw125. Epub 2016 Jun 24.

4.

Effects of the linker region on the structure and function of modular GH5 cellulases.

Ruiz DM, Turowski VR, Murakami MT.

Sci Rep. 2016 Jun 23;6:28504. doi: 10.1038/srep28504.

PMID:
27334041
Free PMC Article
5.

Type II Toxin-Antitoxin Distribution and Adaptive Aspects on Xanthomonas Genomes: Focus on Xanthomonas citri.

Martins PM, Machado MA, Silva NV, Takita MA, de Souza AA.

Front Microbiol. 2016 May 10;7:652. doi: 10.3389/fmicb.2016.00652. eCollection 2016.

6.

UniProt-DAAC: domain architecture alignment and classification, a new method for automatic functional annotation in UniProtKB.

Doğan T, MacDougall A, Saidi R, Poggioli D, Bateman A, O'Donovan C, Martin MJ.

Bioinformatics. 2016 Aug 1;32(15):2264-71. doi: 10.1093/bioinformatics/btw114. Epub 2016 Mar 7.

7.

Thrombospondin Type-1 Repeat Domain-Containing Proteins Are Strongly Expressed in the Head Region of Hydra.

Hamaguchi-Hamada K, Kurumata-Shigeto M, Minobe S, Fukuoka N, Sato M, Matsufuji M, Koizumi O, Hamada S.

PLoS One. 2016 Apr 4;11(4):e0151823. doi: 10.1371/journal.pone.0151823. eCollection 2016.

8.

Comprehensive Phylogenetic Analysis Sheds Light on the Diversity and Origin of the MLO Family of Integral Membrane Proteins.

Kusch S, Pesch L, Panstruga R.

Genome Biol Evol. 2016 Mar 26;8(3):878-95. doi: 10.1093/gbe/evw036.

9.

Evidence from Multiple Species that Spider Silk Glue Component ASG2 is a Spidroin.

Collin MA, Clarke TH 3rd, Ayoub NA, Hayashi CY.

Sci Rep. 2016 Feb 15;6:21589. doi: 10.1038/srep21589.

10.

Selective pressure against horizontally acquired prokaryotic genes as a driving force of plastid evolution.

Llorente B, de Souza FS, Soto G, Meyer C, Alonso GD, Flawiá MM, Bravo-Almonacid F, Ayub ND, Rodríguez-Concepción M.

Sci Rep. 2016 Jan 11;6:19036. doi: 10.1038/srep19036.

11.

Antibacterial phage ORFans of Pseudomonas aeruginosa phage LUZ24 reveal a novel MvaT inhibiting protein.

Wagemans J, Delattre AS, Uytterhoeven B, De Smet J, Cenens W, Aertsen A, Ceyssens PJ, Lavigne R.

Front Microbiol. 2015 Nov 6;6:1242. doi: 10.3389/fmicb.2015.01242. eCollection 2015.

12.

Evolution of the EKA family of powdery mildew avirulence-effector genes from the ORF 1 of a LINE retrotransposon.

Amselem J, Vigouroux M, Oberhaensli S, Brown JK, Bindschedler LV, Skamnioti P, Wicker T, Spanu PD, Quesneville H, Sacristán S.

BMC Genomics. 2015 Nov 10;16:917. doi: 10.1186/s12864-015-2185-x.

13.

A multi-objective optimization approach accurately resolves protein domain architectures.

Bernardes JS, Vieira FR, Zaverucha G, Carbone A.

Bioinformatics. 2016 Feb 1;32(3):345-53. doi: 10.1093/bioinformatics/btv582. Epub 2015 Oct 12.

14.

The language of the protein universe.

Scaiewicz A, Levitt M.

Curr Opin Genet Dev. 2015 Dec;35:50-6. doi: 10.1016/j.gde.2015.08.010. Epub 2015 Nov 3. Review.

PMID:
26451980
15.

"PP2C7s", Genes Most Highly Elaborated in Photosynthetic Organisms, Reveal the Bacterial Origin and Stepwise Evolution of PPM/PP2C Protein Phosphatases.

Kerk D, Silver D, Uhrig RG, Moorhead GB.

PLoS One. 2015 Aug 4;10(8):e0132863. doi: 10.1371/journal.pone.0132863. eCollection 2015.

16.

Phylogeny of the Vitamin K 2,3-Epoxide Reductase (VKOR) Family and Evolutionary Relationship to the Disulfide Bond Formation Protein B (DsbB) Family.

Bevans CG, Krettler C, Reinhart C, Watzka M, Oldenburg J.

Nutrients. 2015 Jul 29;7(8):6224-49. doi: 10.3390/nu7085281.

17.

Chimeric adaptor proteins translocate diverse type VI secretion system effectors in Vibrio cholerae.

Unterweger D, Kostiuk B, Ötjengerdes R, Wilton A, Diaz-Satizabal L, Pukatzki S.

EMBO J. 2015 Aug 13;34(16):2198-210. doi: 10.15252/embj.201591163. Epub 2015 Jul 19.

18.

A prevalent peptide-binding domain guides ribosomal natural product biosynthesis.

Burkhart BJ, Hudson GA, Dunbar KL, Mitchell DA.

Nat Chem Biol. 2015 Aug;11(8):564-70. doi: 10.1038/nchembio.1856. Epub 2015 Jul 13.

19.

Soybean (Glycine max) SWEET gene family: insights through comparative genomics, transcriptome profiling and whole genome re-sequence analysis.

Patil G, Valliyodan B, Deshmukh R, Prince S, Nicander B, Zhao M, Sonah H, Song L, Lin L, Chaudhary J, Liu Y, Joshi T, Xu D, Nguyen HT.

BMC Genomics. 2015 Jul 11;16:520. doi: 10.1186/s12864-015-1730-y.

20.

Characterization of Cellobiose Dehydrogenase from a Biotechnologically Important Cerrena unicolor Strain.

Sulej J, Janusz G, Osińska-Jaroszuk M, Rachubik P, Mazur A, Komaniecka I, Choma A, Rogalski J.

Appl Biochem Biotechnol. 2015 Jul;176(6):1638-58. doi: 10.1007/s12010-015-1667-2. Epub 2015 May 24.

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