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Results: 17

1.

Combining evidence of preferential gene-tissue relationships from multiple sources.

Guo J, Hammar M, Oberg L, Padmanabhuni SS, Bjäreland M, Dalevi D.

PLoS One. 2013 Aug 12;8(8):e70568. doi: 10.1371/journal.pone.0070568. eCollection 2013.

PMID:
23950964
[PubMed - indexed for MEDLINE]
Free PMC Article
2.

Systems biology, bioinformatics, and biomarkers in neuropsychiatry.

Alawieh A, Zaraket FA, Li JL, Mondello S, Nokkari A, Razafsha M, Fadlallah B, Boustany RM, Kobeissy FH.

Front Neurosci. 2012 Dec 24;6:187. doi: 10.3389/fnins.2012.00187. eCollection 2012.

PMID:
23269912
[PubMed]
Free PMC Article
3.

Analysis of intron sequence features associated with transcriptional regulation in human genes.

Li H, Chen D, Zhang J.

PLoS One. 2012;7(10):e46784. doi: 10.1371/journal.pone.0046784. Epub 2012 Oct 17.

PMID:
23082130
[PubMed - indexed for MEDLINE]
Free PMC Article
4.

Comparative proteomics reveals a significant bias toward alternative protein isoforms with conserved structure and function.

Ezkurdia I, del Pozo A, Frankish A, Rodriguez JM, Harrow J, Ashman K, Valencia A, Tress ML.

Mol Biol Evol. 2012 Sep;29(9):2265-83. doi: 10.1093/molbev/mss100. Epub 2012 Mar 22.

PMID:
22446687
[PubMed - indexed for MEDLINE]
Free PMC Article
5.

Expression level, cellular compartment and metabolic network position all influence the average selective constraint on mammalian enzymes.

Hudson CM, Conant GC.

BMC Evol Biol. 2011 Apr 6;11:89. doi: 10.1186/1471-2148-11-89.

PMID:
21470417
[PubMed - indexed for MEDLINE]
Free PMC Article
6.

SiPaGene: A new repository for instant online retrieval, sharing and meta-analyses of GeneChip expression data.

Menssen A, Edinger G, Grün JR, Haase U, Baumgrass R, Grützkau A, Radbruch A, Burmester GR, Häupl T.

BMC Genomics. 2009 Mar 5;10:98. doi: 10.1186/1471-2164-10-98.

PMID:
19265543
[PubMed - indexed for MEDLINE]
Free PMC Article
7.

Navigating public microarray databases.

Penkett CJ, Bähler J.

Comp Funct Genomics. 2004;5(6-7):471-9. doi: 10.1002/cfg.427.

PMID:
18629145
[PubMed]
Free PMC Article
8.

Protein structure protection commits gene expression patterns.

Chen J, Liang H, Fernández A.

Genome Biol. 2008;9(7):R107. doi: 10.1186/gb-2008-9-7-r107. Epub 2008 Jul 7.

PMID:
18606003
[PubMed - indexed for MEDLINE]
Free PMC Article
9.

Tissue-specific differences in human transfer RNA expression.

Dittmar KA, Goodenbour JM, Pan T.

PLoS Genet. 2006 Dec;2(12):e221. Epub 2006 Nov 13.

PMID:
17194224
[PubMed - indexed for MEDLINE]
Free PMC Article
10.

Mining housekeeping genes with a Naive Bayes classifier.

De Ferrari L, Aitken S.

BMC Genomics. 2006 Oct 30;7:277.

PMID:
17074078
[PubMed - indexed for MEDLINE]
Free PMC Article
11.

Selection of housekeeping genes for gene expression studies in human reticulocytes using real-time PCR.

Silver N, Best S, Jiang J, Thein SL.

BMC Mol Biol. 2006 Oct 6;7:33.

PMID:
17026756
[PubMed - indexed for MEDLINE]
Free PMC Article
12.

Transcriptional and structural impact of TATA-initiation site spacing in mammalian core promoters.

Ponjavic J, Lenhard B, Kai C, Kawai J, Carninci P, Hayashizaki Y, Sandelin A.

Genome Biol. 2006;7(8):R78. Epub 2006 Aug 17.

PMID:
16916456
[PubMed - indexed for MEDLINE]
Free PMC Article
13.

Database of mRNA gene expression profiles of multiple human organs.

Son CG, Bilke S, Davis S, Greer BT, Wei JS, Whiteford CC, Chen QR, Cenacchi N, Khan J.

Genome Res. 2005 Mar;15(3):443-50.

PMID:
15741514
[PubMed - indexed for MEDLINE]
Free PMC Article
14.

Microarray and comparative genomics-based identification of genes and gene regulatory regions of the mouse immune system.

Hutton JJ, Jegga AG, Kong S, Gupta A, Ebert C, Williams S, Katz JD, Aronow BJ.

BMC Genomics. 2004 Oct 25;5:82.

PMID:
15504237
[PubMed - indexed for MEDLINE]
Free PMC Article
15.

Integrative annotation of 21,037 human genes validated by full-length cDNA clones.

Imanishi T, Itoh T, Suzuki Y, O'Donovan C, Fukuchi S, Koyanagi KO, Barrero RA, Tamura T, Yamaguchi-Kabata Y, Tanino M, Yura K, Miyazaki S, Ikeo K, Homma K, Kasprzyk A, Nishikawa T, Hirakawa M, Thierry-Mieg J, Thierry-Mieg D, Ashurst J, Jia L, Nakao M, Thomas MA, Mulder N, Karavidopoulou Y, Jin L, Kim S, Yasuda T, Lenhard B, Eveno E, Suzuki Y, Yamasaki C, Takeda J, Gough C, Hilton P, Fujii Y, Sakai H, Tanaka S, Amid C, Bellgard M, Bonaldo Mde F, Bono H, Bromberg SK, Brookes AJ, Bruford E, Carninci P, Chelala C, Couillault C, de Souza SJ, Debily MA, Devignes MD, Dubchak I, Endo T, Estreicher A, Eyras E, Fukami-Kobayashi K, Gopinath GR, Graudens E, Hahn Y, Han M, Han ZG, Hanada K, Hanaoka H, Harada E, Hashimoto K, Hinz U, Hirai M, Hishiki T, Hopkinson I, Imbeaud S, Inoko H, Kanapin A, Kaneko Y, Kasukawa T, Kelso J, Kersey P, Kikuno R, Kimura K, Korn B, Kuryshev V, Makalowska I, Makino T, Mano S, Mariage-Samson R, Mashima J, Matsuda H, Mewes HW, Minoshima S, Nagai K, Nagasaki H, Nagata N, Nigam R, Ogasawara O, Ohara O, Ohtsubo M, Okada N, Okido T, Oota S, Ota M, Ota T, Otsuki T, Piatier-Tonneau D, Poustka A, Ren SX, Saitou N, Sakai K, Sakamoto S, Sakate R, Schupp I, Servant F, Sherry S, Shiba R, Shimizu N, Shimoyama M, Simpson AJ, Soares B, Steward C, Suwa M, Suzuki M, Takahashi A, Tamiya G, Tanaka H, Taylor T, Terwilliger JD, Unneberg P, Veeramachaneni V, Watanabe S, Wilming L, Yasuda N, Yoo HS, Stodolsky M, Makalowski W, Go M, Nakai K, Takagi T, Kanehisa M, Sakaki Y, Quackenbush J, Okazaki Y, Hayashizaki Y, Hide W, Chakraborty R, Nishikawa K, Sugawara H, Tateno Y, Chen Z, Oishi M, Tonellato P, Apweiler R, Okubo K, Wagner L, Wiemann S, Strausberg RL, Isogai T, Auffray C, Nomura N, Gojobori T, Sugano S.

PLoS Biol. 2004 Jun;2(6):e162. Epub 2004 Apr 20. Erratum in: PLoS Biol. 2004 Jul;2(7):e256.

PMID:
15103394
[PubMed - indexed for MEDLINE]
Free PMC Article
16.

Dependence of mutational asymmetry on gene-expression levels in the human genome.

Majewski J.

Am J Hum Genet. 2003 Sep;73(3):688-92. Epub 2003 Jul 24.

PMID:
12881777
[PubMed - indexed for MEDLINE]
Free PMC Article
17.

Protein prenyltransferases.

Maurer-Stroh S, Washietl S, Eisenhaber F.

Genome Biol. 2003;4(4):212. Epub 2003 Apr 1. Review.

PMID:
12702202
[PubMed - indexed for MEDLINE]
Free PMC Article

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