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Results: 1 to 20 of 24

1.

Small proteins: untapped area of potential biological importance.

Su M, Ling Y, Yu J, Wu J, Xiao J.

Front Genet. 2013 Dec 16;4:286. doi: 10.3389/fgene.2013.00286. Review.

PMID:
24379829
[PubMed]
Free PMC Article
2.

Re-annotation of protein-coding genes in the genome of saccharomyces cerevisiae based on support vector machines.

Lin D, Yin X, Wang X, Zhou P, Guo FB.

PLoS One. 2013 Jul 10;8(7):e64477. doi: 10.1371/journal.pone.0064477. Print 2013.

PMID:
23874379
[PubMed - indexed for MEDLINE]
Free PMC Article
3.

Hundreds of putatively functional small open reading frames in Drosophila.

Ladoukakis E, Pereira V, Magny EG, Eyre-Walker A, Couso JP.

Genome Biol. 2011 Nov 25;12(11):R118. doi: 10.1186/gb-2011-12-11-r118.

PMID:
22118156
[PubMed - indexed for MEDLINE]
Free PMC Article
4.

Characterization of a new multigene family encoding isomaltases in the yeast Saccharomyces cerevisiae, the IMA family.

Teste MA, François JM, Parrou JL.

J Biol Chem. 2010 Aug 27;285(35):26815-24. doi: 10.1074/jbc.M110.145946. Epub 2010 Jun 18.

PMID:
20562106
[PubMed - indexed for MEDLINE]
Free PMC Article
5.

ORF organization and gene recognition in the yeast genome.

Luo L, Li H, Zhang L.

Comp Funct Genomics. 2003;4(3):318-28. doi: 10.1002/cfg.292.

PMID:
18629282
[PubMed]
Free PMC Article
6.

Why are there still over 1000 uncharacterized yeast genes?

Peña-Castillo L, Hughes TR.

Genetics. 2007 May;176(1):7-14. Epub 2007 Apr 15. Review.

PMID:
17435240
[PubMed - indexed for MEDLINE]
Free PMC Article
7.

Saccharomyces cerevisiae S288C genome annotation: a working hypothesis.

Fisk DG, Ball CA, Dolinski K, Engel SR, Hong EL, Issel-Tarver L, Schwartz K, Sethuraman A, Botstein D, Cherry JM; Saccharomyces Genome Database Project.

Yeast. 2006 Sep;23(12):857-65.

PMID:
17001629
[PubMed - indexed for MEDLINE]
Free PMC Article
8.

Functional genomics of genes with small open reading frames (sORFs) in S. cerevisiae.

Kastenmayer JP, Ni L, Chu A, Kitchen LE, Au WC, Yang H, Carter CD, Wheeler D, Davis RW, Boeke JD, Snyder MA, Basrai MA.

Genome Res. 2006 Mar;16(3):365-73.

PMID:
16510898
[PubMed - indexed for MEDLINE]
Free PMC Article
9.

Genome Snapshot: a new resource at the Saccharomyces Genome Database (SGD) presenting an overview of the Saccharomyces cerevisiae genome.

Hirschman JE, Balakrishnan R, Christie KR, Costanzo MC, Dwight SS, Engel SR, Fisk DG, Hong EL, Livstone MS, Nash R, Park J, Oughtred R, Skrzypek M, Starr B, Theesfeld CL, Williams J, Andrada R, Binkley G, Dong Q, Lane C, Miyasato S, Sethuraman A, Schroeder M, Thanawala MK, Weng S, Dolinski K, Botstein D, Cherry JM.

Nucleic Acids Res. 2006 Jan 1;34(Database issue):D442-5.

PMID:
16381907
[PubMed - indexed for MEDLINE]
Free PMC Article
10.

Biochemical and genetic analysis of the yeast proteome with a movable ORF collection.

Gelperin DM, White MA, Wilkinson ML, Kon Y, Kung LA, Wise KJ, Lopez-Hoyo N, Jiang L, Piccirillo S, Yu H, Gerstein M, Dumont ME, Phizicky EM, Snyder M, Grayhack EJ.

Genes Dev. 2005 Dec 1;19(23):2816-26.

PMID:
16322557
[PubMed - indexed for MEDLINE]
Free PMC Article
11.

Yos1p is a novel subunit of the Yip1p-Yif1p complex and is required for transport between the endoplasmic reticulum and the Golgi complex.

Heidtman M, Chen CZ, Collins RN, Barlowe C.

Mol Biol Cell. 2005 Apr;16(4):1673-83. Epub 2005 Jan 19.

PMID:
15659647
[PubMed - indexed for MEDLINE]
Free PMC Article
12.

Fungal BLAST and Model Organism BLASTP Best Hits: new comparison resources at the Saccharomyces Genome Database (SGD).

Balakrishnan R, Christie KR, Costanzo MC, Dolinski K, Dwight SS, Engel SR, Fisk DG, Hirschman JE, Hong EL, Nash R, Oughtred R, Skrzypek M, Theesfeld CL, Binkley G, Dong Q, Lane C, Sethuraman A, Weng S, Botstein D, Cherry JM.

Nucleic Acids Res. 2005 Jan 1;33(Database issue):D374-7.

PMID:
15608219
[PubMed - indexed for MEDLINE]
Free PMC Article
13.

Large-scale exploration of growth inhibition caused by overexpression of genomic fragments in Saccharomyces cerevisiae.

Boyer J, Badis G, Fairhead C, Talla E, Hantraye F, Fabre E, Fischer G, Hennequin C, Koszul R, Lafontaine I, Ozier-Kalogeropoulos O, Ricchetti M, Richard GF, Thierry A, Dujon B.

Genome Biol. 2004;5(9):R72. Epub 2004 Aug 31.

PMID:
15345056
[PubMed - indexed for MEDLINE]
Free PMC Article
14.

Differential evolution of the Saccharomyces cerevisiae DUP240 paralogs and implication of recombination in phylogeny.

Leh-Louis V, Wirth B, Despons L, Wain-Hobson S, Potier S, Souciet JL.

Nucleic Acids Res. 2004 Apr 15;32(7):2069-78. Print 2004.

PMID:
15087486
[PubMed - indexed for MEDLINE]
Free PMC Article
15.

Charting gene regulatory networks: strategies, challenges and perspectives.

Wei GH, Liu DP, Liang CC.

Biochem J. 2004 Jul 1;381(Pt 1):1-12. Review.

PMID:
15080794
[PubMed - indexed for MEDLINE]
Free PMC Article
16.

A novel design of whole-genome microarray probes for Saccharomyces cerevisiae which minimizes cross-hybridization.

Talla E, Tekaia F, Brino L, Dujon B.

BMC Genomics. 2003 Sep 22;4(1):38.

PMID:
14499002
[PubMed - indexed for MEDLINE]
Free PMC Article
17.

Perturbation of transcription elongation influences the fidelity of internal exon inclusion in Saccharomyces cerevisiae.

Howe KJ, Kane CM, Ares M Jr.

RNA. 2003 Aug;9(8):993-1006.

PMID:
12869710
[PubMed - indexed for MEDLINE]
Free PMC Article
18.

Reinvestigation of the Saccharomyces cerevisiae genome annotation by comparison to the genome of a related fungus: Ashbya gossypii.

Brachat S, Dietrich FS, Voegeli S, Zhang Z, Stuart L, Lerch A, Gates K, Gaffney T, Philippsen P.

Genome Biol. 2003;4(7):R45. Epub 2003 Jun 25.

PMID:
12844361
[PubMed - indexed for MEDLINE]
Free PMC Article
19.

Schizosaccharomyces pombe essential genes: a pilot study.

Decottignies A, Sanchez-Perez I, Nurse P.

Genome Res. 2003 Mar;13(3):399-406.

PMID:
12618370
[PubMed - indexed for MEDLINE]
Free PMC Article
20.

Systematic discovery of new genes in the Saccharomyces cerevisiae genome.

Kessler MM, Zeng Q, Hogan S, Cook R, Morales AJ, Cottarel G.

Genome Res. 2003 Feb;13(2):264-71.

PMID:
12566404
[PubMed - indexed for MEDLINE]
Free PMC Article

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