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Items: 1 to 20 of 82

1.

Activation of a T-box-Otx2-Gsc gene network independent of TBP and TBP-related factors.

Gazdag E, Jacobi UG, van Kruijsbergen I, Weeks DL, Veenstra GJ.

Development. 2016 Apr 15;143(8):1340-50. doi: 10.1242/dev.127936. Epub 2016 Mar 7.

2.

Core promoter-specific gene regulation: TATA box selectivity and Initiator-dependent bi-directionality of serum response factor-activated transcription.

Xu M, Gonzalez-Hurtado E, Martinez E.

Biochim Biophys Acta. 2016 Apr;1859(4):553-63. doi: 10.1016/j.bbagrm.2016.01.005. Epub 2016 Jan 26.

PMID:
26824723
3.

Regulation of Antisense Transcription by NuA4 Histone Acetyltransferase and Other Chromatin Regulatory Factors.

Uprety B, Kaja A, Ferdoush J, Sen R, Bhaumik SR.

Mol Cell Biol. 2016 Jan 11;36(6):992-1006. doi: 10.1128/MCB.00808-15.

4.

Eaf1p Is Required for Recruitment of NuA4 in Targeting TFIID to the Promoters of the Ribosomal Protein Genes for Transcriptional Initiation In Vivo.

Uprety B, Sen R, Bhaumik SR.

Mol Cell Biol. 2015 Sep 1;35(17):2947-64. doi: 10.1128/MCB.01524-14. Epub 2015 Jun 22.

5.

Mutations on the DNA binding surface of TBP discriminate between yeast TATA and TATA-less gene transcription.

Kamenova I, Warfield L, Hahn S.

Mol Cell Biol. 2014 Aug;34(15):2929-43. doi: 10.1128/MCB.01685-13. Epub 2014 May 27.

6.

The TAF9 C-terminal conserved region domain is required for SAGA and TFIID promoter occupancy to promote transcriptional activation.

Saint M, Sawhney S, Sinha I, Singh RP, Dahiya R, Thakur A, Siddharthan R, Natarajan K.

Mol Cell Biol. 2014 May;34(9):1547-63. doi: 10.1128/MCB.01060-13. Epub 2014 Feb 18.

7.

Mechanisms of antisense transcription initiation from the 3' end of the GAL10 coding sequence in vivo.

Malik S, Durairaj G, Bhaumik SR.

Mol Cell Biol. 2013 Sep;33(18):3549-67. doi: 10.1128/MCB.01715-12. Epub 2013 Jul 8.

8.

Direct TFIIA-TFIID protein contacts drive budding yeast ribosomal protein gene transcription.

Layer JH, Weil PA.

J Biol Chem. 2013 Aug 9;288(32):23273-94. doi: 10.1074/jbc.M113.486829. Epub 2013 Jun 27.

9.

A conserved role for human Nup98 in altering chromatin structure and promoting epigenetic transcriptional memory.

Light WH, Freaney J, Sood V, Thompson A, D'Urso A, Horvath CM, Brickner JH.

PLoS Biol. 2013;11(3):e1001524. doi: 10.1371/journal.pbio.1001524. Epub 2013 Mar 26.

10.

Non-canonical TAF complexes regulate active promoters in human embryonic stem cells.

Maston GA, Zhu LJ, Chamberlain L, Lin L, Fang M, Green MR.

Elife. 2012 Nov 13;1:e00068. doi: 10.7554/eLife.00068.

11.

Preferential repair of DNA double-strand break at the active gene in vivo.

Chaurasia P, Sen R, Pandita TK, Bhaumik SR.

J Biol Chem. 2012 Oct 19;287(43):36414-22. doi: 10.1074/jbc.M112.364661. Epub 2012 Aug 21.

12.
14.

A comprehensive genomic binding map of gene and chromatin regulatory proteins in Saccharomyces.

Venters BJ, Wachi S, Mavrich TN, Andersen BE, Jena P, Sinnamon AJ, Jain P, Rolleri NS, Jiang C, Hemeryck-Walsh C, Pugh BF.

Mol Cell. 2011 Feb 18;41(4):480-92. doi: 10.1016/j.molcel.2011.01.015.

15.

The mRNA cap-binding complex stimulates the formation of pre-initiation complex at the promoter via its interaction with Mot1p in vivo.

Lahudkar S, Shukla A, Bajwa P, Durairaj G, Stanojevic N, Bhaumik SR.

Nucleic Acids Res. 2011 Mar;39(6):2188-209. doi: 10.1093/nar/gkq1029. Epub 2010 Nov 12.

16.

Sequential recruitment of SAGA and TFIID in a genomic response to DNA damage in Saccharomyces cerevisiae.

Ghosh S, Pugh BF.

Mol Cell Biol. 2011 Jan;31(1):190-202. doi: 10.1128/MCB.00317-10. Epub 2010 Oct 18.

17.

Highly redundant function of multiple AT-rich sequences as core promoter elements in the TATA-less RPS5 promoter of Saccharomyces cerevisiae.

Sugihara F, Kasahara K, Kokubo T.

Nucleic Acids Res. 2011 Jan;39(1):59-75. doi: 10.1093/nar/gkq741. Epub 2010 Aug 30.

18.

Distinct regulatory mechanisms of eukaryotic transcriptional activation by SAGA and TFIID.

Bhaumik SR.

Biochim Biophys Acta. 2011 Feb;1809(2):97-108. doi: 10.1016/j.bbagrm.2010.08.009. Epub 2010 Aug 26. Review.

19.

Dominant role for signal transduction in the transcriptional memory of yeast GAL genes.

Kundu S, Peterson CL.

Mol Cell Biol. 2010 May;30(10):2330-40. doi: 10.1128/MCB.01675-09. Epub 2010 Mar 8.

20.

Direct transactivator-transcription factor IID (TFIID) contacts drive yeast ribosomal protein gene transcription.

Layer JH, Miller SG, Weil PA.

J Biol Chem. 2010 May 14;285(20):15489-99. doi: 10.1074/jbc.M110.104810. Epub 2010 Feb 26.

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