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Results: 1 to 20 of 25

1.

An arginine-aspartate network in the active site of bacterial TruB is critical for catalyzing pseudouridine formation.

Friedt J, Leavens FM, Mercier E, Wieden HJ, Kothe U.

Nucleic Acids Res. 2014 Apr;42(6):3857-70. doi: 10.1093/nar/gkt1331. Epub 2013 Dec 26.

PMID:
24371284
[PubMed - indexed for MEDLINE]
Free PMC Article
2.

Methylation of 23S rRNA nucleotide G748 by RlmAII methyltransferase renders Streptococcus pneumoniae telithromycin susceptible.

Takaya A, Sato Y, Shoji T, Yamamoto T.

Antimicrob Agents Chemother. 2013 Aug;57(8):3789-96. doi: 10.1128/AAC.00164-13. Epub 2013 May 28.

PMID:
23716046
[PubMed - indexed for MEDLINE]
Free PMC Article
3.

Pre-steady-state kinetic analysis of the three Escherichia coli pseudouridine synthases TruB, TruA, and RluA reveals uniformly slow catalysis.

Wright JR, Keffer-Wilkes LC, Dobing SR, Kothe U.

RNA. 2011 Dec;17(12):2074-84. doi: 10.1261/rna.2905811. Epub 2011 Oct 13.

PMID:
21998096
[PubMed - indexed for MEDLINE]
Free PMC Article
4.

Suppression of DeltabipA phenotypes in Escherichia coli by abolishment of pseudouridylation at specific sites on the 23S rRNA.

Krishnan K, Flower AM.

J Bacteriol. 2008 Dec;190(23):7675-83. doi: 10.1128/JB.00835-08. Epub 2008 Sep 26.

PMID:
18820021
[PubMed - indexed for MEDLINE]
Free PMC Article
5.

Characterization of chromosomal regions conserved in Yersinia pseudotuberculosis and lost by Yersinia pestis.

Pouillot F, Fayolle C, Carniel E.

Infect Immun. 2008 Oct;76(10):4592-9. doi: 10.1128/IAI.00568-08. Epub 2008 Aug 4.

PMID:
18678673
[PubMed - indexed for MEDLINE]
Free PMC Article
6.

Partial activity is seen with many substitutions of highly conserved active site residues in human Pseudouridine synthase 1.

Sibert BS, Fischel-Ghodsian N, Patton JR.

RNA. 2008 Sep;14(9):1895-906. doi: 10.1261/rna.984508. Epub 2008 Jul 22.

PMID:
18648068
[PubMed - indexed for MEDLINE]
Free PMC Article
7.

RluD, a highly conserved pseudouridine synthase, modifies 50S subunits more specifically and efficiently than free 23S rRNA.

Vaidyanathan PP, Deutscher MP, Malhotra A.

RNA. 2007 Nov;13(11):1868-76. Epub 2007 Sep 13.

PMID:
17872507
[PubMed - indexed for MEDLINE]
Free PMC Article
8.

Identification of determinants in the protein partners aCBF5 and aNOP10 necessary for the tRNA:Psi55-synthase and RNA-guided RNA:Psi-synthase activities.

Muller S, Fourmann JB, Loegler C, Charpentier B, Branlant C.

Nucleic Acids Res. 2007;35(16):5610-24. Epub 2007 Aug 17.

PMID:
17704128
[PubMed - indexed for MEDLINE]
Free PMC Article
9.

Site-specific modification of Shigella flexneri virF mRNA by tRNA-guanine transglycosylase in vitro.

Hurt JK, Olgen S, Garcia GA.

Nucleic Acids Res. 2007;35(14):4905-13. Epub 2007 Jul 10.

PMID:
17626052
[PubMed - indexed for MEDLINE]
Free PMC Article
10.

Identification of novel Escherichia coli ribosome-associated proteins using isobaric tags and multidimensional protein identification techniques.

Jiang M, Sullivan SM, Walker AK, Strahler JR, Andrews PC, Maddock JR.

J Bacteriol. 2007 May;189(9):3434-44. Epub 2007 Mar 2.

PMID:
17337586
[PubMed - indexed for MEDLINE]
Free PMC Article
11.

Optimization of ribosome structure and function by rRNA base modification.

Baxter-Roshek JL, Petrov AN, Dinman JD.

PLoS One. 2007 Jan 24;2(1):e174.

PMID:
17245450
[PubMed - indexed for MEDLINE]
Free PMC Article
12.

Solution structure of psi32-modified anticodon stem-loop of Escherichia coli tRNAPhe.

Cabello-Villegas J, Nikonowicz EP.

Nucleic Acids Res. 2005 Dec 23;33(22):6961-71. Print 2005.

PMID:
16377777
[PubMed - indexed for MEDLINE]
Free PMC Article
13.

The pseudouridine synthase RluD is required for normal ribosome assembly and function in Escherichia coli.

Gutgsell NS, Deutscher MP, Ofengand J.

RNA. 2005 Jul;11(7):1141-52. Epub 2005 May 31.

PMID:
15928344
[PubMed - indexed for MEDLINE]
Free PMC Article
14.

Conformational change of pseudouridine 55 synthase upon its association with RNA substrate.

Phannachet K, Huang RH.

Nucleic Acids Res. 2004 Feb 27;32(4):1422-9. Print 2004.

PMID:
14990747
[PubMed - indexed for MEDLINE]
Free PMC Article
15.

Identifying the methyltransferases for m(5)U747 and m(5)U1939 in 23S rRNA using MALDI mass spectrometry.

Madsen CT, Mengel-Jørgensen J, Kirpekar F, Douthwaite S.

Nucleic Acids Res. 2003 Aug 15;31(16):4738-46.

PMID:
12907714
[PubMed - indexed for MEDLINE]
Free PMC Article
16.

Caenorhabditis elegans pseudouridine synthase 1 activity in vivo: tRNA is a substrate, but not U2 small nuclear RNA.

Patton JR, Padgett RW.

Biochem J. 2003 Jun 1;372(Pt 2):595-602.

PMID:
12597772
[PubMed - indexed for MEDLINE]
Free PMC Article
17.

Three modifications in the D and T arms of tRNA influence translation in Escherichia coli and expression of virulence genes in Shigella flexneri.

Urbonavicius J, Durand JM, Björk GR.

J Bacteriol. 2002 Oct;184(19):5348-57.

PMID:
12218021
[PubMed - indexed for MEDLINE]
Free PMC Article
18.

Identification and site of action of the remaining four putative pseudouridine synthases in Escherichia coli.

Del Campo M, Kaya Y, Ofengand J.

RNA. 2001 Nov;7(11):1603-15.

PMID:
11720289
[PubMed - indexed for MEDLINE]
Free PMC Article
20.

Small nucleolar RNA-guided post-transcriptional modification of cellular RNAs.

Kiss T.

EMBO J. 2001 Jul 16;20(14):3617-22. Review. No abstract available.

PMID:
11447102
[PubMed - indexed for MEDLINE]
Free PMC Article

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