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Items: 1 to 20 of 137

1.

Prediction of membrane proteins based on classification of transmembrane segments.

Kihara D, Shimizu T, Kanehisa M.

Protein Eng. 1998 Nov;11(11):961-70.

2.

Preference functions for prediction of membrane-buried helices in integral membrane proteins.

Juretić D, Zucić D, Lucić B, Trinajstić N.

Comput Chem. 1998 Jun 20;22(4):279-94.

PMID:
9680689
3.
5.

Computational differentiation of N-terminal signal peptides and transmembrane helices.

Yuan Z, Davis MJ, Zhang F, Teasdale RD.

Biochem Biophys Res Commun. 2003 Dec 26;312(4):1278-83.

PMID:
14652012
6.

Prediction of Golgi Type II membrane proteins based on their transmembrane domains.

Yuan Z, Teasdale RD.

Bioinformatics. 2002 Aug;18(8):1109-15.

7.

Prediction of membrane protein types from sequences and position-specific scoring matrices.

Pu X, Guo J, Leung H, Lin Y.

J Theor Biol. 2007 Jul 21;247(2):259-65. Epub 2007 Jan 30.

PMID:
17433369
8.

A predictor of transmembrane alpha-helix domains of proteins based on neural networks.

Casadio R, Fariselli P, Taroni C, Compiani M.

Eur Biophys J. 1996;24(3):165-78.

PMID:
8852561
9.

Using amino acid and peptide composition to predict membrane protein types.

Yang XG, Luo RY, Feng ZP.

Biochem Biophys Res Commun. 2007 Feb 2;353(1):164-9. Epub 2006 Dec 8.

PMID:
17174938
10.
11.

Conformational preference functions for predicting helices in membrane proteins.

Juretić D, Lee B, Trinajstić N, Williams RW.

Biopolymers. 1993 Feb;33(2):255-73.

PMID:
8485300
12.

Prediction of helix-helix contacts and interacting helices in polytopic membrane proteins using neural networks.

Fuchs A, Kirschner A, Frishman D.

Proteins. 2009 Mar;74(4):857-71. doi: 10.1002/prot.22194.

PMID:
18704938
13.

Prediction of transmembrane segments in proteins utilising multiple sequence alignments.

Persson B, Argos P.

J Mol Biol. 1994 Mar 25;237(2):182-92.

PMID:
8126732
14.

Prediction of membrane protein types by incorporating amphipathic effects.

Chou KC, Cai YD.

J Chem Inf Model. 2005 Mar-Apr;45(2):407-13.

PMID:
15807506
15.

Sequence similarity as a predictor of the transmembrane topology of membrane-intrinsic subunits of bacterial respiratory chain enzymes.

Rothery RA, Kalra N, Turner RJ, Weiner JH.

J Mol Microbiol Biotechnol. 2002 Mar;4(2):133-50.

PMID:
11873909
16.

Triage protein fold prediction.

He H, McAllister G, Smith TF.

Proteins. 2002 Sep 1;48(4):654-63.

PMID:
12211033
19.

The prediction of amphiphilic alpha-helices.

Phoenix DA, Harris F, Daman OA, Wallace J.

Curr Protein Pept Sci. 2002 Apr;3(2):201-21. Review.

PMID:
12188904
20.

Prediction of membrane protein types and subcellular locations.

Chou KC, Elrod DW.

Proteins. 1999 Jan 1;34(1):137-53.

PMID:
10336379
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