Similar articles for PMID: 37077982

Year	Number of Results
2012	1
2015	2
2016	2
2017	14
2018	4
2019	16
2020	16
2021	26
2022	14
2023	7
2024	0

1

Plant genome sequence assembly in the era of long reads: Progress, challenges and future directions.

Pucker B, Irisarri I, de Vries J, Xu B. Pucker B, et al. Quant Plant Biol. 2022 Mar 11;3:e5. doi: 10.1017/qpb.2021.18. eCollection 2022. Quant Plant Biol. 2022. PMID: 37077982 Free PMC article. Review.

2

Comparison of ONT and CCS sequencing technologies on the polyploid genome of a medicinal plant showed that high error rate of ONT reads are not suitable for self-correction.

Zeng P, Tian Z, Han Y, Zhang W, Zhou T, Peng Y, Hu H, Cai J. Zeng P, et al. Chin Med. 2022 Aug 9;17(1):94. doi: 10.1186/s13020-022-00644-1. Chin Med. 2022. PMID: 35945546 Free PMC article.

3

Comparison of the two up-to-date sequencing technologies for genome assembly: HiFi reads of Pacific Biosciences Sequel II system and ultralong reads of Oxford Nanopore.

Lang D, Zhang S, Ren P, Liang F, Sun Z, Meng G, Tan Y, Li X, Lai Q, Han L, Wang D, Hu F, Wang W, Liu S. Lang D, et al. Gigascience. 2020 Dec 15;9(12):giaa123. doi: 10.1093/gigascience/giaa123. Gigascience. 2020. PMID: 33319909 Free PMC article.

4

Highly accurate long reads are crucial for realizing the potential of biodiversity genomics.

Hotaling S, Wilcox ER, Heckenhauer J, Stewart RJ, Frandsen PB. Hotaling S, et al. BMC Genomics. 2023 Mar 16;24(1):117. doi: 10.1186/s12864-023-09193-9. BMC Genomics. 2023. PMID: 36927511 Free PMC article.

5

Comparison of long-read sequencing technologies in the hybrid assembly of complex bacterial genomes.

De Maio N, Shaw LP, Hubbard A, George S, Sanderson ND, Swann J, Wick R, AbuOun M, Stubberfield E, Hoosdally SJ, Crook DW, Peto TEA, Sheppard AE, Bailey MJ, Read DS, Anjum MF, Walker AS, Stoesser N, On Behalf Of The Rehab Consortium. De Maio N, et al. Microb Genom. 2019 Sep;5(9):e000294. doi: 10.1099/mgen.0.000294. Epub 2019 Aug 30. Microb Genom. 2019. PMID: 31483244 Free PMC article.

6

Comparison of long-read methods for sequencing and assembly of a plant genome.

Murigneux V, Rai SK, Furtado A, Bruxner TJC, Tian W, Harliwong I, Wei H, Yang B, Ye Q, Anderson E, Mao Q, Drmanac R, Wang O, Peters BA, Xu M, Wu P, Topp B, Coin LJM, Henry RJ. Murigneux V, et al. Gigascience. 2020 Dec 21;9(12):giaa146. doi: 10.1093/gigascience/giaa146. Gigascience. 2020. PMID: 33347571 Free PMC article.

7

Evaluation of strategies for the assembly of diverse bacterial genomes using MinION long-read sequencing.

Goldstein S, Beka L, Graf J, Klassen JL. Goldstein S, et al. BMC Genomics. 2019 Jan 9;20(1):23. doi: 10.1186/s12864-018-5381-7. BMC Genomics. 2019. PMID: 30626323 Free PMC article.

8

Oxford Nanopore sequencing: new opportunities for plant genomics?

Dumschott K, Schmidt MH, Chawla HS, Snowdon R, Usadel B. Dumschott K, et al. J Exp Bot. 2020 Sep 19;71(18):5313-5322. doi: 10.1093/jxb/eraa263. J Exp Bot. 2020. PMID: 32459850 Free PMC article.

9

Evaluation of assembly methods combining long-reads and short-reads to obtain Paenibacillus sp. R4 high-quality complete genome.

Shin SC, Choi W, Lee J, Kim HJ, Kim HW. Shin SC, et al. 3 Biotech. 2020 Nov;10(11):480. doi: 10.1007/s13205-020-02474-0. Epub 2020 Oct 19. 3 Biotech. 2020. PMID: 33094089 Free PMC article.

10

Comparison of De Novo Assembly Strategies for Bacterial Genomes.

Zhang P, Jiang D, Wang Y, Yao X, Luo Y, Yang Z. Zhang P, et al. Int J Mol Sci. 2021 Jul 17;22(14):7668. doi: 10.3390/ijms22147668. Int J Mol Sci. 2021. PMID: 34299288 Free PMC article.

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