Similar articles for PMID: 33511996

Year	Number of Results
2004	1
2005	1
2007	1
2010	5
2011	3
2012	6
2013	5
2014	8
2015	9
2016	3
2017	12
2018	14
2019	16
2020	13
2021	25
2022	33
2023	15
2024	0

1

Transcriptome annotation in the cloud: complexity, best practices, and cost.

Alvarez RV, Mariño-Ramírez L, Landsman D. Alvarez RV, et al. Gigascience. 2021 Jan 29;10(2):giaa163. doi: 10.1093/gigascience/giaa163. Gigascience. 2021. PMID: 33511996 Free PMC article.

2

ElasticBLAST: accelerating sequence search via cloud computing.

Camacho C, Boratyn GM, Joukov V, Vera Alvarez R, Madden TL. Camacho C, et al. BMC Bioinformatics. 2023 Mar 26;24(1):117. doi: 10.1186/s12859-023-05245-9. BMC Bioinformatics. 2023. PMID: 36967390 Free PMC article.

3

APRICOT: Advanced Platform for Reproducible Infrastructures in the Cloud via Open Tools.

Giménez-Alventosa V, Segrelles JD, Moltó G, Roca-Sogorb M. Giménez-Alventosa V, et al. Methods Inf Med. 2020 Dec;59(S 02):e33-e45. doi: 10.1055/s-0040-1712460. Epub 2020 Aug 10. Methods Inf Med. 2020. PMID: 32777825 Free PMC article.

4

MC-GenomeKey: a multicloud system for the detection and annotation of genomic variants.

Elshazly H, Souilmi Y, Tonellato PJ, Wall DP, Abouelhoda M. Elshazly H, et al. BMC Bioinformatics. 2017 Jan 20;18(1):49. doi: 10.1186/s12859-016-1454-2. BMC Bioinformatics. 2017. PMID: 28107819 Free PMC article.

5

Accumulating computational resource usage of genomic data analysis workflow to optimize cloud computing instance selection.

Ohta T, Tanjo T, Ogasawara O. Ohta T, et al. Gigascience. 2019 Apr 1;8(4):giz052. doi: 10.1093/gigascience/giz052. Gigascience. 2019. PMID: 31222199 Free PMC article.

6

cryoem-cloud-tools: A software platform to deploy and manage cryo-EM jobs in the cloud.

Cianfrocco MA, Lahiri I, DiMaio F, Leschziner AE. Cianfrocco MA, et al. J Struct Biol. 2018 Sep;203(3):230-235. doi: 10.1016/j.jsb.2018.05.014. Epub 2018 Jun 1. J Struct Biol. 2018. PMID: 29864529 Free PMC article.

7

Support for Taverna workflows in the VPH-Share cloud platform.

Kasztelnik M, Coto E, Bubak M, Malawski M, Nowakowski P, Arenas J, Saglimbeni A, Testi D, Frangi AF. Kasztelnik M, et al. Comput Methods Programs Biomed. 2017 Jul;146:37-46. doi: 10.1016/j.cmpb.2017.05.006. Epub 2017 May 20. Comput Methods Programs Biomed. 2017. PMID: 28688488 Free article.

8

Genomics Virtual Laboratory: A Practical Bioinformatics Workbench for the Cloud.

Afgan E, Sloggett C, Goonasekera N, Makunin I, Benson D, Crowe M, Gladman S, Kowsar Y, Pheasant M, Horst R, Lonie A. Afgan E, et al. PLoS One. 2015 Oct 26;10(10):e0140829. doi: 10.1371/journal.pone.0140829. eCollection 2015. PLoS One. 2015. PMID: 26501966 Free PMC article.

9

Scalable Workflows and Reproducible Data Analysis for Genomics.

Strozzi F, Janssen R, Wurmus R, Crusoe MR, Githinji G, Di Tommaso P, Belhachemi D, Möller S, Smant G, de Ligt J, Prins P. Strozzi F, et al. Methods Mol Biol. 2019;1910:723-745. doi: 10.1007/978-1-4939-9074-0_24. Methods Mol Biol. 2019. PMID: 31278683 Free PMC article.

10

Running Neuroimaging Applications on Amazon Web Services: How, When, and at What Cost?

Madhyastha TM, Koh N, Day TKM, Hernández-Fernández M, Kelley A, Peterson DJ, Rajan S, Woelfer KA, Wolf J, Grabowski TJ. Madhyastha TM, et al. Front Neuroinform. 2017 Nov 3;11:63. doi: 10.3389/fninf.2017.00063. eCollection 2017. Front Neuroinform. 2017. PMID: 29163119 Free PMC article.

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