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Items: 1 to 20 of 122

1.

Impact of next generation sequencing techniques in food microbiology.

Mayo B, Rachid CT, Alegría A, Leite AM, Peixoto RS, Delgado S.

Curr Genomics. 2014 Aug;15(4):293-309. doi: 10.2174/1389202915666140616233211.

2.

Next-generation approaches to the microbial ecology of food fermentations.

Bokulich NA, Mills DA.

BMB Rep. 2012 Jul;45(7):377-89.

3.

Next-generation sequencing (NGS) in the microbiological world: How to make the most of your money.

Vincent AT, Derome N, Boyle B, Culley AI, Charette SJ.

J Microbiol Methods. 2016 Mar 16. pii: S0167-7012(16)30031-8. doi: 10.1016/j.mimet.2016.02.016. [Epub ahead of print] Review.

PMID:
26995332
4.

Analysis of plant microbe interactions in the era of next generation sequencing technologies.

Knief C.

Front Plant Sci. 2014 May 21;5:216. doi: 10.3389/fpls.2014.00216. eCollection 2014. Review.

5.

Next-generation sequencing: the future of molecular genetics in poultry production and food safety.

Diaz-Sanchez S, Hanning I, Pendleton S, D'Souza D.

Poult Sci. 2013 Feb;92(2):562-72. doi: 10.3382/ps.2012-02741. Review.

PMID:
23300324
6.

Comparing microarrays and next-generation sequencing technologies for microbial ecology research.

Roh SW, Abell GC, Kim KH, Nam YD, Bae JW.

Trends Biotechnol. 2010 Jun;28(6):291-9. doi: 10.1016/j.tibtech.2010.03.001. Epub 2010 Apr 8. Review.

PMID:
20381183
7.

Next-generation sequencing (NGS) for assessment of microbial water quality: current progress, challenges, and future opportunities.

Tan B, Ng C, Nshimyimana JP, Loh LL, Gin KY, Thompson JR.

Front Microbiol. 2015 Sep 25;6:1027. doi: 10.3389/fmicb.2015.01027. eCollection 2015. Review.

8.

Culture independent methods to assess the diversity and dynamics of microbiota during food fermentation.

Cocolin L, Alessandria V, Dolci P, Gorra R, Rantsiou K.

Int J Food Microbiol. 2013 Oct 1;167(1):29-43. doi: 10.1016/j.ijfoodmicro.2013.05.008. Epub 2013 May 20. Review.

PMID:
23791362
9.

Sequencing technologies and genome sequencing.

Pareek CS, Smoczynski R, Tretyn A.

J Appl Genet. 2011 Nov;52(4):413-35. doi: 10.1007/s13353-011-0057-x. Epub 2011 Jun 23. Review.

10.

Applications for next-generation sequencing in fish ecotoxicogenomics.

Mehinto AC, Martyniuk CJ, Spade DJ, Denslow ND.

Front Genet. 2012 Apr 25;3:62. doi: 10.3389/fgene.2012.00062. eCollection 2012.

11.

Pseudo-Sanger sequencing: massively parallel production of long and near error-free reads using NGS technology.

Ruan J, Jiang L, Chong Z, Gong Q, Li H, Li C, Tao Y, Zheng C, Zhai W, Turissini D, Cannon CH, Lu X, Wu CI.

BMC Genomics. 2013 Oct 17;14:711. doi: 10.1186/1471-2164-14-711.

12.

Next generation sequencing in clinical medicine: Challenges and lessons for pathology and biomedical informatics.

Gullapalli RR, Desai KV, Santana-Santos L, Kant JA, Becich MJ.

J Pathol Inform. 2012;3:40. doi: 10.4103/2153-3539.103013. Epub 2012 Oct 31.

13.

Navigating the rapids: the development of regulated next-generation sequencing-based clinical trial assays and companion diagnostics.

Pant S, Weiner R, Marton MJ.

Front Oncol. 2014 Apr 17;4:78. doi: 10.3389/fonc.2014.00078. eCollection 2014. Review.

14.

An integrated pipeline for next generation sequencing and annotation of the complete mitochondrial genome of the giant intestinal fluke, Fasciolopsis buski (Lankester, 1857) Looss, 1899.

Biswal DK, Ghatani S, Shylla JA, Sahu R, Mullapudi N, Bhattacharya A, Tandon V.

PeerJ. 2013 Nov 12;1:e207. doi: 10.7717/peerj.207. eCollection 2013.

15.

HLA typing by next-generation sequencing - getting closer to reality.

Gabriel C, Fürst D, Faé I, Wenda S, Zollikofer C, Mytilineos J, Fischer GF.

Tissue Antigens. 2014 Feb;83(2):65-75. doi: 10.1111/tan.12298. Review.

PMID:
24447174
16.

Next-generation sequencing applications for wheat crop improvement.

Berkman PJ, Lai K, Lorenc MT, Edwards D.

Am J Bot. 2012 Feb;99(2):365-71. doi: 10.3732/ajb.1100309. Epub 2012 Jan 20. Review.

17.

Applications of next-generation sequencing in plant biology.

Egan AN, Schlueter J, Spooner DM.

Am J Bot. 2012 Feb;99(2):175-85. doi: 10.3732/ajb.1200020. Epub 2012 Feb 6.

18.

Application of state-of-art sequencing technologies to indigenous food fermentations.

van Hijum SA, Vaughan EE, Vogel RF.

Curr Opin Biotechnol. 2013 Apr;24(2):178-86. doi: 10.1016/j.copbio.2012.08.004. Epub 2012 Sep 6. Review.

PMID:
22960050
19.

ngs_backbone: a pipeline for read cleaning, mapping and SNP calling using next generation sequence.

Blanca JM, Pascual L, Ziarsolo P, Nuez F, Cañizares J.

BMC Genomics. 2011 Jun 2;12:285. doi: 10.1186/1471-2164-12-285.

20.

Sequence depth, not PCR replication, improves ecological inference from next generation DNA sequencing.

Smith DP, Peay KG.

PLoS One. 2014 Feb 28;9(2):e90234. doi: 10.1371/journal.pone.0090234. eCollection 2014.

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