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Results: 1 to 20 of 118

Similar articles for PubMed (Select 25028422)

1.

Multisubstrate isotope labeling and metagenomic analysis of active soil bacterial communities.

Verastegui Y, Cheng J, Engel K, Kolczynski D, Mortimer S, Lavigne J, Montalibet J, Romantsov T, Hall M, McConkey BJ, Rose DR, Tomashek JJ, Scott BR, Charles TC, Neufeld JD.

MBio. 2014 Jul 15;5(4):e01157-14. doi: 10.1128/mBio.01157-14.

2.

Recovering glycoside hydrolase genes from active tundra cellulolytic bacteria.

Pinnell LJ, Dunford E, Ronan P, Hausner M, Neufeld JD.

Can J Microbiol. 2014 Jul;60(7):469-76. doi: 10.1139/cjm-2014-0193. Epub 2014 Jun 11.

PMID:
24983351
3.

Revealing the uncultivated majority: combining DNA stable-isotope probing, multiple displacement amplification and metagenomic analyses of uncultivated Methylocystis in acidic peatlands.

Chen Y, Dumont MG, Neufeld JD, Bodrossy L, Stralis-Pavese N, McNamara NP, Ostle N, Briones MJ, Murrell JC.

Environ Microbiol. 2008 Oct;10(10):2609-22. doi: 10.1111/j.1462-2920.2008.01683.x. Epub 2008 Jul 10.

PMID:
18631364
4.

Metagenomic analysis of isotopically enriched DNA.

Chen Y, Neufeld JD, Dumont MG, Friedrich MW, Murrell JC.

Methods Mol Biol. 2010;668:67-75. doi: 10.1007/978-1-60761-823-2_4.

PMID:
20830556
5.

[Applications and perspectives of DNA stable-isotope probing in metagenomics: a review].

Liu W, Wei X, Yuan J, Huang L.

Sheng Wu Gong Cheng Xue Bao. 2011 Apr;27(4):539-45. Review. Chinese.

PMID:
21847987
6.

Identification of a complete methane monooxygenase operon from soil by combining stable isotope probing and metagenomic analysis.

Dumont MG, Radajewski SM, Miguez CB, McDonald IR, Murrell JC.

Environ Microbiol. 2006 Jul;8(7):1240-50.

PMID:
16817932
7.

Identification of cellulose-responsive bacterial and fungal communities in geographically and edaphically different soils by using stable isotope probing.

Eichorst SA, Kuske CR.

Appl Environ Microbiol. 2012 Apr;78(7):2316-27. doi: 10.1128/AEM.07313-11. Epub 2012 Jan 27.

8.

Marine methylotrophs revealed by stable-isotope probing, multiple displacement amplification and metagenomics.

Neufeld JD, Chen Y, Dumont MG, Murrell JC.

Environ Microbiol. 2008 Jun;10(6):1526-35. doi: 10.1111/j.1462-2920.2008.01568.x. Epub 2008 Feb 18.

PMID:
18294205
10.

Soil bacterial community shifts after chitin enrichment: an integrative metagenomic approach.

Jacquiod S, Franqueville L, Cécillon S, Vogel TM, Simonet P.

PLoS One. 2013 Nov 20;8(11):e79699. doi: 10.1371/journal.pone.0079699. eCollection 2013.

11.

When metagenomics meets stable-isotope probing: progress and perspectives.

Chen Y, Murrell JC.

Trends Microbiol. 2010 Apr;18(4):157-63. doi: 10.1016/j.tim.2010.02.002. Epub 2010 Mar 4. Review.

PMID:
20202846
12.

Validation of heavy-water stable isotope probing for the characterization of rapidly responding soil bacteria.

Aanderud ZT, Lennon JT.

Appl Environ Microbiol. 2011 Jul;77(13):4589-96. doi: 10.1128/AEM.02735-10. Epub 2011 May 6.

13.

Stable isotope probing in the metagenomics era: a bridge towards improved bioremediation.

Uhlik O, Leewis MC, Strejcek M, Musilova L, Mackova M, Leigh MB, Macek T.

Biotechnol Adv. 2013 Mar-Apr;31(2):154-65. doi: 10.1016/j.biotechadv.2012.09.003. Epub 2012 Sep 26. Review.

14.

Multiple DNA extractions coupled with stable-isotope probing of anthracene-degrading bacteria in contaminated soil.

Jones MD, Singleton DR, Sun W, Aitken MD.

Appl Environ Microbiol. 2011 May;77(9):2984-91. doi: 10.1128/AEM.01942-10. Epub 2011 Mar 11.

15.
16.

Metabolic responses of novel cellulolytic and saccharolytic agricultural soil Bacteria to oxygen.

Schellenberger S, Kolb S, Drake HL.

Environ Microbiol. 2010 Apr;12(4):845-61. doi: 10.1111/j.1462-2920.2009.02128.x. Epub 2009 Dec 27.

PMID:
20050868
17.

Coupled high-throughput functional screening and next generation sequencing for identification of plant polymer decomposing enzymes in metagenomic libraries.

Nyyssönen M, Tran HM, Karaoz U, Weihe C, Hadi MZ, Martiny JB, Martiny AC, Brodie EL.

Front Microbiol. 2013 Sep 23;4:282. doi: 10.3389/fmicb.2013.00282. eCollection 2013.

18.
19.

Identification of novel lipolytic genes and gene families by screening of metagenomic libraries derived from soil samples of the German Biodiversity Exploratories.

Nacke H, Will C, Herzog S, Nowka B, Engelhaupt M, Daniel R.

FEMS Microbiol Ecol. 2011 Oct;78(1):188-201. doi: 10.1111/j.1574-6941.2011.01088.x. Epub 2011 Apr 6.

20.

Stable isotope probing with 15N2 reveals novel noncultivated diazotrophs in soil.

Buckley DH, Huangyutitham V, Hsu SF, Nelson TA.

Appl Environ Microbiol. 2007 May;73(10):3196-204. Epub 2007 Mar 16.

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