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Similar articles for PubMed (Select 24928876)

1.

Automated design of probes for rRNA-targeted fluorescence in situ hybridization reveals the advantages of using dual probes for accurate identification.

Wright ES, Yilmaz LS, Corcoran AM, Ökten HE, Noguera DR.

Appl Environ Microbiol. 2014 Aug;80(16):5124-33. doi: 10.1128/AEM.01685-14. Epub 2014 Jun 13.

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probeBase: an online resource for rRNA-targeted oligonucleotide probes.

Loy A, Horn M, Wagner M.

Nucleic Acids Res. 2003 Jan 1;31(1):514-6.

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An update and optimisation of oligonucleotide probes targeting methanogenic Archaea for use in fluorescence in situ hybridisation (FISH).

Crocetti G, Murto M, Björnsson L.

J Microbiol Methods. 2006 Apr;65(1):194-201. Epub 2005 Aug 26.

PMID:
16126291
7.

Modeling formamide denaturation of probe-target hybrids for improved microarray probe design in microbial diagnostics.

Yilmaz LS, Loy A, Wright ES, Wagner M, Noguera DR.

PLoS One. 2012;7(8):e43862. doi: 10.1371/journal.pone.0043862. Epub 2012 Aug 27.

8.

Making all parts of the 16S rRNA of Escherichia coli accessible in situ to single DNA oligonucleotides.

Yilmaz LS, Okten HE, Noguera DR.

Appl Environ Microbiol. 2006 Jan;72(1):733-44.

9.

probeBase--an online resource for rRNA-targeted oligonucleotide probes: new features 2007.

Loy A, Maixner F, Wagner M, Horn M.

Nucleic Acids Res. 2007 Jan;35(Database issue):D800-4. Epub 2006 Nov 11.

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Rapid identification of the animal pathogens Streptococcus uberis and Arcanobacterium pyogenes by fluorescence in situ hybridization (FISH).

Werckenthin C, Gey A, Straubinger RK, Poppert S.

Vet Microbiol. 2012 May 4;156(3-4):330-5. doi: 10.1016/j.vetmic.2011.10.007. Epub 2011 Oct 15.

PMID:
22033042
12.

Quantification of target molecules needed to detect microorganisms by fluorescence in situ hybridization (FISH) and catalyzed reporter deposition-FISH.

Hoshino T, Yilmaz LS, Noguera DR, Daims H, Wagner M.

Appl Environ Microbiol. 2008 Aug;74(16):5068-77. doi: 10.1128/AEM.00208-08. Epub 2008 Jun 13.

13.

A straightforward DOPE (double labeling of oligonucleotide probes)-FISH (fluorescence in situ hybridization) method for simultaneous multicolor detection of six microbial populations.

Behnam F, Vilcinskas A, Wagner M, Stoecker K.

Appl Environ Microbiol. 2012 Aug;78(15):5138-42. doi: 10.1128/AEM.00977-12. Epub 2012 May 11.

14.

[Identification of Mycobacterium species from BACTEC MGIT™ positive cultures with Oligo-FISH and PNA-FISH methods].

Börekci G, Aslan G, Aydin E, Fiandaca MJ, Stender H, Lee NM, Özkul Y, Emekdaş G.

Mikrobiyol Bul. 2014 Jul;48(3):385-401. Turkish.

15.

Variations of bacterial populations in human feces measured by fluorescent in situ hybridization with group-specific 16S rRNA-targeted oligonucleotide probes.

Franks AH, Harmsen HJ, Raangs GC, Jansen GJ, Schut F, Welling GW.

Appl Environ Microbiol. 1998 Sep;64(9):3336-45.

16.

Order-specific 16S rRNA-targeted oligonucleotide probes for (hyper)thermophilic archaea and bacteria.

Rusch A, Amend JP.

Extremophiles. 2004 Oct;8(5):357-66. Epub 2004 May 27.

PMID:
15168171
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Oligonucleotide probes for RNA-targeted fluorescence in situ hybridization.

Silverman AP, Kool ET.

Adv Clin Chem. 2007;43:79-115. Review.

PMID:
17249381
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Double labeling of oligonucleotide probes for fluorescence in situ hybridization (DOPE-FISH) improves signal intensity and increases rRNA accessibility.

Stoecker K, Dorninger C, Daims H, Wagner M.

Appl Environ Microbiol. 2010 Feb;76(3):922-6. doi: 10.1128/AEM.02456-09. Epub 2009 Dec 4.

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