Display Settings:

Format
Items per page
Sort by

Send to:

Choose Destination

Results: 1 to 20 of 97

1.

Integrated Analysis Platform: An Open-Source Information System for High-Throughput Plant Phenotyping.

Klukas C, Chen D, Pape JM.

Plant Physiol. 2014 Apr 23;165(2):506-518. [Epub ahead of print]

PMID:
24760818
[PubMed - as supplied by publisher]
Free PMC Article
2.

Analysis of high-throughput plant image data with the information system IAP.

Klukas C, Pape JM, Entzian A.

J Integr Bioinform. 2012 Jun 29;9(2):191. doi: 10.2390/biecoll-jib-2012-191.

PMID:
22745177
[PubMed - indexed for MEDLINE]
3.

HTPheno: an image analysis pipeline for high-throughput plant phenotyping.

Hartmann A, Czauderna T, Hoffmann R, Stein N, Schreiber F.

BMC Bioinformatics. 2011 May 12;12:148. doi: 10.1186/1471-2105-12-148.

PMID:
21569390
[PubMed - indexed for MEDLINE]
Free PMC Article
4.

A high-performance spatial database based approach for pathology imaging algorithm evaluation.

Wang F, Kong J, Gao J, Cooper LA, Kurc T, Zhou Z, Adler D, Vergara-Niedermayr C, Katigbak B, Brat DJ, Saltz JH.

J Pathol Inform. 2013 Mar 14;4:5. doi: 10.4103/2153-3539.108543. Print 2013.

PMID:
23599905
[PubMed]
Free PMC Article
5.

High-throughput two-dimensional root system phenotyping platform facilitates genetic analysis of root growth and development.

Clark RT, Famoso AN, Zhao K, Shaff JE, Craft EJ, Bustamante CD, McCouch SR, Aneshansley DJ, Kochian LV.

Plant Cell Environ. 2013 Feb;36(2):454-66. doi: 10.1111/j.1365-3040.2012.02587.x. Epub 2012 Sep 3.

PMID:
22860896
[PubMed - indexed for MEDLINE]
6.

Surface feature based classification of plant organs from 3D laserscanned point clouds for plant phenotyping.

Paulus S, Dupuis J, Mahlein AK, Kuhlmann H.

BMC Bioinformatics. 2013 Jul 27;14:238. doi: 10.1186/1471-2105-14-238.

PMID:
23890277
[PubMed - indexed for MEDLINE]
Free PMC Article
7.

Dissecting the Phenotypic Components of Crop Plant Growth and Drought Responses Based on High-Throughput Image Analysis.

Chen D, Neumann K, Friedel S, Kilian B, Chen M, Altmann T, Klukas C.

Plant Cell. 2014 Dec 11. pii: tpc.114.129601. [Epub ahead of print]

PMID:
25501589
[PubMed - as supplied by publisher]
Free Article
8.

High-throughput phenotyping of plant shoots.

Berger B, de Regt B, Tester M.

Methods Mol Biol. 2012;918:9-20. doi: 10.1007/978-1-61779-995-2_2.

PMID:
22893282
[PubMed - indexed for MEDLINE]
9.

Computer aided data acquisition tool for high-throughput phenotyping of plant populations.

Vankadavath RN, Hussain AJ, Bodanapu R, Kharshiing E, Basha PO, Gupta S, Sreelakshmi Y, Sharma R.

Plant Methods. 2009 Dec 10;5:18. doi: 10.1186/1746-4811-5-18.

PMID:
20003250
[PubMed]
Free PMC Article
10.

Purdue ionomics information management system. An integrated functional genomics platform.

Baxter I, Ouzzani M, Orcun S, Kennedy B, Jandhyala SS, Salt DE.

Plant Physiol. 2007 Feb;143(2):600-11. Epub 2006 Dec 22.

PMID:
17189337
[PubMed - indexed for MEDLINE]
Free PMC Article
11.

Phenoscope: an automated large-scale phenotyping platform offering high spatial homogeneity.

Tisné S, Serrand Y, Bach L, Gilbault E, Ben Ameur R, Balasse H, Voisin R, Bouchez D, Durand-Tardif M, Guerche P, Chareyron G, Da Rugna J, Camilleri C, Loudet O.

Plant J. 2013 May;74(3):534-44. doi: 10.1111/tpj.12131. Epub 2013 Mar 16.

PMID:
23452317
[PubMed - indexed for MEDLINE]
12.

High-throughput identification, database storage and analysis of SNPs in EST sequences.

Useche FJ, Gao G, Harafey M, Rafalski A.

Genome Inform. 2001;12:194-203.

PMID:
11791238
[PubMed - indexed for MEDLINE]
13.

Cell to whole-plant phenotyping: the best is yet to come.

Dhondt S, Wuyts N, Inzé D.

Trends Plant Sci. 2013 Aug;18(8):428-39. doi: 10.1016/j.tplants.2013.04.008. Epub 2013 May 23. Review.

PMID:
23706697
[PubMed - indexed for MEDLINE]
14.

Image-based high-throughput field phenotyping of crop roots.

Bucksch A, Burridge J, York LM, Das A, Nord E, Weitz JS, Lynch JP.

Plant Physiol. 2014 Oct;166(2):470-86. doi: 10.1104/pp.114.243519. Epub 2014 Sep 3.

PMID:
25187526
[PubMed - in process]
Free PMC Article
15.

PHENOPSIS DB: an information system for Arabidopsis thaliana phenotypic data in an environmental context.

Fabre J, Dauzat M, Nègre V, Wuyts N, Tireau A, Gennari E, Neveu P, Tisné S, Massonnet C, Hummel I, Granier C.

BMC Plant Biol. 2011 May 9;11:77. doi: 10.1186/1471-2229-11-77.

PMID:
21554668
[PubMed - indexed for MEDLINE]
Free PMC Article
16.

Gene ARMADA: an integrated multi-analysis platform for microarray data implemented in MATLAB.

Chatziioannou A, Moulos P, Kolisis FN.

BMC Bioinformatics. 2009 Oct 27;10:354. doi: 10.1186/1471-2105-10-354.

PMID:
19860866
[PubMed - indexed for MEDLINE]
Free PMC Article
17.

Anima: modular workflow system for comprehensive image data analysis.

Rantanen V, Valori M, Hautaniemi S.

Front Bioeng Biotechnol. 2014 Jul 30;2:25. doi: 10.3389/fbioe.2014.00025. eCollection 2014.

PMID:
25126541
[PubMed]
Free PMC Article
18.

Analysis of maize (Zea mays L.) seedling roots with the high-throughput image analysis tool ARIA (Automatic Root Image Analysis).

Pace J, Lee N, Naik HS, Ganapathysubramanian B, Lübberstedt T.

PLoS One. 2014 Sep 24;9(9):e108255. doi: 10.1371/journal.pone.0108255. eCollection 2014.

PMID:
25251072
[PubMed - in process]
Free PMC Article
19.

Imaging and analysis platform for automatic phenotyping and trait ranking of plant root systems.

Iyer-Pascuzzi AS, Symonova O, Mileyko Y, Hao Y, Belcher H, Harer J, Weitz JS, Benfey PN.

Plant Physiol. 2010 Mar;152(3):1148-57. doi: 10.1104/pp.109.150748. Epub 2010 Jan 27.

PMID:
20107024
[PubMed - indexed for MEDLINE]
Free PMC Article
20.

MausDB: an open source application for phenotype data and mouse colony management in large-scale mouse phenotyping projects.

Maier H, Lengger C, Simic B, Fuchs H, Gailus-Durner V, Hrabé de Angelis M.

BMC Bioinformatics. 2008 Mar 26;9:169. doi: 10.1186/1471-2105-9-169.

PMID:
18366799
[PubMed - indexed for MEDLINE]
Free PMC Article

Display Settings:

Format
Items per page
Sort by

Send to:

Choose Destination

Supplemental Content

Write to the Help Desk