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Nucleotide excision repair in Trypanosoma brucei: specialization of transcription-coupled repair due to multigenic transcription.

Machado CR, Vieira-da-Rocha JP, Mendes IC, Rajão MA, Marcello L, Bitar M, Drummond MG, Grynberg P, Oliveira DA, Marques C, Van Houten B, McCulloch R.

Mol Microbiol. 2014 May;92(4):756-76. doi: 10.1111/mmi.12589. Epub 2014 Apr 24.


Trypanosoma brucei harbours a divergent XPB helicase paralogue that is specialized in nucleotide excision repair and conserved among kinetoplastid organisms.

Badjatia N, Nguyen TN, Lee JH, Günzl A.

Mol Microbiol. 2013 Dec;90(6):1293-308. doi: 10.1111/mmi.12435. Epub 2013 Nov 8.


The role of Cockayne syndrome group A (CSA) protein in transcription-coupled nucleotide excision repair.

Saijo M.

Mech Ageing Dev. 2013 May-Jun;134(5-6):196-201. doi: 10.1016/j.mad.2013.03.008. Epub 2013 Apr 6. Review.


Cell-type-specific consequences of nucleotide excision repair deficiencies: Embryonic stem cells versus fibroblasts.

de Waard H, Sonneveld E, de Wit J, Esveldt-van Lange R, Hoeijmakers JH, Vrieling H, van der Horst GT.

DNA Repair (Amst). 2008 Oct 1;7(10):1659-69. doi: 10.1016/j.dnarep.2008.06.009. Epub 2008 Jul 26.


Tfb5 is partially dispensable for Rad26 mediated transcription coupled nucleotide excision repair in yeast.

Ding B, Ruggiero C, Chen X, Li S.

DNA Repair (Amst). 2007 Nov;6(11):1661-9. Epub 2007 Jul 20.


DNA damage response and transcription.

Lagerwerf S, Vrouwe MG, Overmeer RM, Fousteri MI, Mullenders LH.

DNA Repair (Amst). 2011 Jul 15;10(7):743-50. doi: 10.1016/j.dnarep.2011.04.024. Epub 2011 May 31. Review.


Lack of strand-specific repair of UV-induced DNA lesions in three genes of the archaeon Sulfolobus solfataricus.

Romano V, Napoli A, Salerno V, Valenti A, Rossi M, Ciaramella M.

J Mol Biol. 2007 Jan 26;365(4):921-9. Epub 2006 Oct 19.


Transcription-coupled nucleotide excision repair in mammalian cells: molecular mechanisms and biological effects.

Fousteri M, Mullenders LH.

Cell Res. 2008 Jan;18(1):73-84. doi: 10.1038/cr.2008.6. Review.


Nucleotide excision repair and its interplay with transcription.

van Hoffen A, Balajee AS, van Zeeland AA, Mullenders LH.

Toxicology. 2003 Nov 15;193(1-2):79-90. Review.


Nucleotide excision repair-initiating proteins bind to oxidative DNA lesions in vivo.

Menoni H, Hoeijmakers JH, Vermeulen W.

J Cell Biol. 2012 Dec 24;199(7):1037-46. doi: 10.1083/jcb.201205149. Epub 2012 Dec 17.


Nucleotide excision repair and the 26S proteasome function together to promote trinucleotide repeat expansions.

Concannon C, Lahue RS.

DNA Repair (Amst). 2014 Jan;13:42-9. doi: 10.1016/j.dnarep.2013.11.004. Epub 2013 Dec 17.


Genome-wide analysis of factors affecting transcription elongation and DNA repair: a new role for PAF and Ccr4-not in transcription-coupled repair.

Gaillard H, Tous C, Botet J, González-Aguilera C, Quintero MJ, Viladevall L, García-Rubio ML, Rodríguez-Gil A, Marín A, Ariño J, Revuelta JL, Chávez S, Aguilera A.

PLoS Genet. 2009 Feb;5(2):e1000364. doi: 10.1371/journal.pgen.1000364. Epub 2009 Feb 6.


Double mutants of Saccharomyces cerevisiae with alterations in global genome and transcription-coupled repair.

Verhage RA, van Gool AJ, de Groot N, Hoeijmakers JH, van de Putte P, Brouwer J.

Mol Cell Biol. 1996 Feb;16(2):496-502.


DNA nucleotide excision repair-dependent signaling to checkpoint activation.

Marini F, Nardo T, Giannattasio M, Minuzzo M, Stefanini M, Plevani P, Muzi Falconi M.

Proc Natl Acad Sci U S A. 2006 Nov 14;103(46):17325-30. Epub 2006 Nov 6.


Repair of 2'-C-cyano-2'-deoxy-1-beta-D-arabino-pentofuranosylcytosine-induced DNA single-strand breaks by transcription-coupled nucleotide excision repair.

Wang Y, Liu X, Matsuda A, Plunkett W.

Cancer Res. 2008 May 15;68(10):3881-9. doi: 10.1158/0008-5472.CAN-07-6885.


Abasic sites in the transcribed strand of yeast DNA are removed by transcription-coupled nucleotide excision repair.

Kim N, Jinks-Robertson S.

Mol Cell Biol. 2010 Jul;30(13):3206-15. doi: 10.1128/MCB.00308-10. Epub 2010 Apr 26.


XPB and XPD helicases in TFIIH orchestrate DNA duplex opening and damage verification to coordinate repair with transcription and cell cycle via CAK kinase.

Fuss JO, Tainer JA.

DNA Repair (Amst). 2011 Jul 15;10(7):697-713. doi: 10.1016/j.dnarep.2011.04.028. Epub 2011 May 14. Review.


RNA interference against transcription elongation factor SII does not support its role in transcription-coupled nucleotide excision repair.

Mackinnon-Roy C, Stubbert LJ, McKay BC.

Mutat Res. 2011 Jan 10;706(1-2):53-8. doi: 10.1016/j.mrfmmm.2010.10.010. Epub 2010 Nov 9.


Oxidative DNA damage and nucleotide excision repair.

Melis JP, van Steeg H, Luijten M.

Antioxid Redox Signal. 2013 Jun 20;18(18):2409-19. doi: 10.1089/ars.2012.5036. Epub 2012 Dec 7. Review.

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