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Results: 1 to 20 of 106

Similar articles for PubMed (Select 24587199)

1.

Post-translational modifications modulate ligand recognition by the third PDZ domain of the MAGUK protein PSD-95.

Murciano-Calles J, Corbi-Verge C, Candel AM, Luque I, Martinez JC.

PLoS One. 2014 Feb 26;9(2):e90030. doi: 10.1371/journal.pone.0090030. eCollection 2014.

2.

The impact of extra-domain structures and post-translational modifications in the folding/misfolding behaviour of the third PDZ domain of MAGUK neuronal protein PSD-95.

Murciano-Calles J, Marin-Argany M, Cobos ES, Villegas S, Martinez JC.

PLoS One. 2014 May 20;9(5):e98124. doi: 10.1371/journal.pone.0098124. eCollection 2014.

3.

Hidden dynamic allostery in a PDZ domain.

Petit CM, Zhang J, Sapienza PJ, Fuentes EJ, Lee AL.

Proc Natl Acad Sci U S A. 2009 Oct 27;106(43):18249-54. doi: 10.1073/pnas.0904492106. Epub 2009 Oct 14.

4.

A thermodynamic ligand binding study of the third PDZ domain (PDZ3) from the mammalian neuronal protein PSD-95.

Saro D, Li T, Rupasinghe C, Paredes A, Caspers N, Spaller MR.

Biochemistry. 2007 May 29;46(21):6340-52. Epub 2007 May 3.

5.
6.

Peptide binding to the PDZ3 domain by conformational selection.

Steiner S, Caflisch A.

Proteins. 2012 Nov;80(11):2562-72. doi: 10.1002/prot.24137. Epub 2012 Jul 28.

PMID:
22753014
7.

Supertertiary structure of the MAGUK core from PSD-95.

Zhang J, Lewis SM, Kuhlman B, Lee AL.

Structure. 2013 Mar 5;21(3):402-13. doi: 10.1016/j.str.2012.12.014. Epub 2013 Feb 7.

8.

Interactions outside the boundaries of the canonical binding groove of a PDZ domain influence ligand binding.

Chi CN, Haq SR, Rinaldo S, Dogan J, Cutruzzolà F, Engström Å, Gianni S, Lundström P, Jemth P.

Biochemistry. 2012 Nov 6;51(44):8971-9. doi: 10.1021/bi300792h. Epub 2012 Oct 23.

PMID:
23046383
9.

Energetic pathway sampling in a protein interaction domain.

Hultqvist G, Haq SR, Punekar AS, Chi CN, Engström Å, Bach A, Strømgaard K, Selmer M, Gianni S, Jemth P.

Structure. 2013 Jul 2;21(7):1193-1202.

10.

T7 phage display as a method of peptide ligand discovery for PDZ domain proteins.

Sharma SC, Memic A, Rupasinghe CN, Duc AC, Spaller MR.

Biopolymers. 2009;92(3):183-93. doi: 10.1002/bip.21172.

PMID:
19235856
11.

Single-amino acid substitutions alter the specificity and affinity of PDZ domains for their ligands.

Gee SH, Quenneville S, Lombardo CR, Chabot J.

Biochemistry. 2000 Nov 28;39(47):14638-46.

PMID:
11087420
12.
13.

The Src homology 3 domain is required for junctional adhesion molecule binding to the third PDZ domain of the scaffolding protein ZO-1.

Nomme J, Fanning AS, Caffrey M, Lye MF, Anderson JM, Lavie A.

J Biol Chem. 2011 Dec 16;286(50):43352-60. doi: 10.1074/jbc.M111.304089. Epub 2011 Oct 26.

14.

Beyond the binding site: the role of the β₂-β₃ loop and extra-domain structures in PDZ domains.

Mostarda S, Gfeller D, Rao F.

PLoS Comput Biol. 2012;8(3):e1002429. doi: 10.1371/journal.pcbi.1002429. Epub 2012 Mar 8.

15.

Structural and thermodynamic analysis of PDZ-ligand interactions.

Shepherd TR, Fuentes EJ.

Methods Enzymol. 2011;488:81-100. doi: 10.1016/B978-0-12-381268-1.00004-5.

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19.

An in silico analysis of the binding modes and binding affinities of small molecule modulators of PDZ-peptide interactions.

Tiwari G, Mohanty D.

PLoS One. 2013 Aug 8;8(8):e71340. doi: 10.1371/journal.pone.0071340. eCollection 2013.

20.

Ligand binding of the second PDZ domain regulates clustering of PSD-95 with the Kv1.4 potassium channel.

Imamura F, Maeda S, Doi T, Fujiyoshi Y.

J Biol Chem. 2002 Feb 1;277(5):3640-6. Epub 2001 Nov 26.

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